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13_1_40cm_4_scaffold_647

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_647_1
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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1..813
DNA (813bp) protein (271aa)
glucose-1-phosphate thymidyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RBG_13_Bathyarchaeota_38_9_curated
rfbA; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidyltransferase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D556_METSW
13_1_40cm_4_scaffold_647_2
Marinobacter sp. EVN1, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(848..1894)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Marinobacter sp. EVN1 RepID=U7NDR0_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:ERS81477.1}; TaxID=1397532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp.
hypothetical protein
13_1_40cm_4_scaffold_647_3
unknown

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comp(2021..2413)
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_40cm_4_scaffold_647_4
unknown

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comp(2519..2686)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_4_scaffold_647_5
Marine Group I thaumarchaeote SCGC RSA3, Thaumarchaeota, Archaea

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2687..2977
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:KFM19932.1}; TaxID=1503183 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC RSA3.;"
13_1_40cm_4_scaffold_647_6
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(3047..4048)
DNA (1002bp) protein (334aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:AEA46569.1}; EC=4.2.1.46 {ECO:0000313|EMBL:AEA46569.1};; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; A
dTDP-glucose 4,6-dehydratase n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQD6_ARCVS
13_1_40cm_4_scaffold_647_7
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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4209..5078
DNA (870bp) protein (290aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:AEG17590.1}; EC=1.1.1.133 {ECO:0000313|EMBL:AEG17590.1};; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanob
dTDP-4-dehydrorhamnose reductase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D555_METSW
13_1_40cm_4_scaffold_647_8

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comp(5093..5572)
DNA (480bp) protein (160aa)
Putative dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=uncultured archaeon RepID=I3RKT2_9ARCH
Putative dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AFK24942.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
dTDP-4-dehydrorhamnose 3 5-epimerase-like protein
13_1_40cm_4_scaffold_647_9
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

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5583..6905
DNA (1323bp) protein (441aa)
SAM-dependent methyltransferase n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KMY1_9ARCH
SAM-dependent methyltransferase {ECO:0000313|EMBL:KKW22152.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
C-methyltransferase
13_1_40cm_4_scaffold_647_10
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(6907..7554)
DNA (648bp) protein (216aa)
Methyltransferase type 11 {ECO:0000313|EMBL:EFO80990.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Osci
type 11 methyltransferase
13_1_40cm_4_scaffold_647_11
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(7539..8519)
DNA (981bp) protein (327aa)
putative glycosyl transferase
Putative glycosyl transferase {ECO:0000313|EMBL:AIE86958.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas
13_1_40cm_4_scaffold_647_12
unknown

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comp(8588..9025)
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_4_scaffold_647_13
unknown

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comp(9168..9827)
DNA (660bp) protein (220aa)

This feature has no annotations

13_1_40cm_4_scaffold_647_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9939..10670
DNA (732bp) protein (244aa)
Methyltransferase FkbM family n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRS9_ALIDB
methyltransferase fkbm family
Methyltransferase FkbM family {ECO:0000313|EMBL:ADV00293.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphil
13_1_40cm_4_scaffold_647_15
Staphylothermus marinus, Staphylothermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(10655..11770)
DNA (1116bp) protein (372aa)
Glycosyl transferase, group 1 n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DN36_STAMF
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABN70046.1}; TaxID=399550 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Staphylothermus.;" source="Staphylotherm
13_1_40cm_4_scaffold_647_16
unknown

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comp(11767..12597)
DNA (831bp) protein (277aa)

This feature has no annotations

13_1_40cm_4_scaffold_647_17

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12717..13085
DNA (369bp) protein (123aa)
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96); K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] id=5084595 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Pterin-4-alpha-carbinolamine dehydratase, 4a-hydroxytetrahydrobiopterin dehydratase {ECO:0000313|EMBL:KKS97934.1}; EC=4.2.1.96 {ECO:0000313|EMBL:KKS97934.1};; TaxID=1618443 species="Bacteria; Microgen
pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
13_1_40cm_4_scaffold_647_18
AR15, Woesearchaeaota, DPANN, Archaea

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comp(13512..14246)
DNA (735bp) protein (245aa)
UPI000038E2D0 related cluster Tax=AR15
UPI000038E2D0 related cluster id=5800598 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
13_1_40cm_4_scaffold_647_19
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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14364..15017
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003817D63
putative DNA binding protein
Putative DNA binding protein {ECO:0000313|EMBL:AIF84718.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus
13_1_40cm_4_scaffold_647_20
Desulfurococcus fermentans, Desulfurococcus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(15700..16152)
DNA (453bp) protein (151aa)
Small heat shock protein HSP20 n=1 Tax=Desulfurococcus fermentans DSM 16532 RepID=I3XSD3_9CREN
small heat shock protein HSP20
Small heat shock protein HSP20 {ECO:0000313|EMBL:AFL66857.1}; TaxID=768672 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Desulfurococcus.;" source="Desulfurococ
13_1_40cm_4_scaffold_647_21
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(16296..16784)
DNA (489bp) protein (163aa)
50S ribosomal protein L30P n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZE0_METFV
50S ribosomal protein L30
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Metha
13_1_40cm_4_scaffold_647_22
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(16787..17419)
DNA (633bp) protein (211aa)
30S ribosomal protein S5 n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T8C7_9ARCH
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RBG_16_Bathyarchaeota_48_13_curated
30S ribosomal protein S5
13_1_40cm_4_scaffold_647_23
RBG_16_Archaea_50_20_curated, Archaea

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comp(17416..18015)
DNA (600bp) protein (200aa)
50S ribosomal protein L18P n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QQR0_VULDI
rpl18p; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L18
13_1_40cm_4_scaffold_647_24
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(18019..18447)
DNA (429bp) protein (143aa)
50S ribosomal protein L19e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZD7_METFV
LSU ribosomal protein l19e; K02885 large subunit ribosomal protein L19e Tax=RBG_13_Bathyarchaeota_38_9_curated
50S ribosomal protein L19e
13_1_40cm_4_scaffold_647_25
Thermoproteus uzoniensis, Thermoproteus, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(18444..18830)
DNA (387bp) protein (129aa)
50S ribosomal protein L32e n=1 Tax=Thermoproteus uzoniensis (strain 768-20) RepID=F2L315_THEU7
50S ribosomal protein L32e
50S ribosomal protein L32e {ECO:0000256|HAMAP-Rule:MF_00810}; TaxID=999630 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Thermoproteus.;" source="Thermoproteus uzon
13_1_40cm_4_scaffold_647_26

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comp(18832..19473)
DNA (642bp) protein (214aa)
50S ribosomal protein L6 n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECG1_PYRF1
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6P
13_1_40cm_4_scaffold_647_27
RBG_16_Archaea_50_20_curated, Archaea

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comp(19484..19867)
DNA (384bp) protein (128aa)
30S ribosomal protein S8 n=1 Tax=uncultured marine crenarchaeote E37-7F RepID=G9BAP1_9CREN
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S8P
13_1_40cm_4_scaffold_647_28
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(20047..20586)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BMD2_HYPBU
rpl5p; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RBG_13_Bathyarchaeota_38_9_curated
rpl5p; 50S ribosomal protein L5P
13_1_40cm_4_scaffold_647_29
unknown

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20652..21128
DNA (477bp) protein (159aa)

This feature has no annotations

13_1_40cm_4_scaffold_647_30
unknown

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21139..21357
DNA (219bp) protein (73aa)

This feature has no annotations

Displaying 30 items

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