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13_1_40cm_4_scaffold_649

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_649_1
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

363..1007
DNA (645bp) protein (215aa)
CelA8 n=1 Tax=Pseudoalteromonas haloplanktis RepID=D9I3V0_PSEHA
Uncharacterized protein {ECO:0000313|EMBL:KJE42359.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
thiol oxidoreductase-like protein
13_1_40cm_4_scaffold_649_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1159..2184
DNA (1026bp) protein (342aa)
kynurenine--oxoglutarate transaminase (EC:2.6.1.7); K10907 aminotransferase [EC:2.6.1.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
aminotransferase (EC:2.6.1.-) id=24561144 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
aminotransferase class I and II
13_1_40cm_4_scaffold_649_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2153..3520)
DNA (1368bp) protein (456aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD13_GEMAT
protein kinase
13_1_40cm_4_scaffold_649_4
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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3692..4948
DNA (1257bp) protein (419aa)
Putative oligopeptide transporter, OPT family n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI45_CHLTF
putative oligopeptide transporter, OPT family
Putative oligopeptide transporter, OPT family {ECO:0000313|EMBL:AEP11261.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacter
13_1_40cm_4_scaffold_649_5
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

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5002..5835
DNA (834bp) protein (278aa)
Oligopeptide transporter, OPT family n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FI06_STIAD
oligopeptide transporter Tax=RBG_16_Zixibacteria_50_21_curated
oligopeptide transporter
13_1_40cm_4_scaffold_649_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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5926..6807
DNA (882bp) protein (294aa)
Periplasmic binding protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARA8_RUBXD
periplasmic binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ABG06070.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Ru
13_1_40cm_4_scaffold_649_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6827..7807
DNA (981bp) protein (327aa)
hypothetical protein; K07282 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative uncharacterized protein id=2924369 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
capsule synthesis protein, CapA
13_1_40cm_4_scaffold_649_8
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

7804..8874
DNA (1071bp) protein (357aa)
Peptidase M42 family protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NFY1_ROSCS
peptidase M42 family protein
Peptidase M42 family protein {ECO:0000313|EMBL:ABU56365.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexu
13_1_40cm_4_scaffold_649_9
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

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8887..9762
DNA (876bp) protein (292aa)
NmrA family protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHP7_ANADF
NmrA family protein Tax=RBG_16_Caldithrix_48_16_curated
NmrA family protein
13_1_40cm_4_scaffold_649_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9759..11606)
DNA (1848bp) protein (616aa)
HEAT-like repeat-containing protein n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74GG0_GEOSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89986.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_649_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11620..12450)
DNA (831bp) protein (277aa)
ABC transporter related n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYV5_ROSS1
ABC transporter-like protein; K02006 cobalt/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC transporter-like protein
13_1_40cm_4_scaffold_649_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(12441..13217)
DNA (777bp) protein (259aa)
ABC transporter related protein n=1 Tax=Geobacillus sp. (strain Y412MC10) RepID=D3EJ31_GEOS4
ABC transporter; K02006 cobalt/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC transporter-like protein
13_1_40cm_4_scaffold_649_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(13214..13927)
DNA (714bp) protein (238aa)
Cobalt transport protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUT4_RUBXD
cobalt transport protein; K02008 cobalt/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative membrane protein
13_1_40cm_4_scaffold_649_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(13924..14493)
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Arthrobacter globiformis NBRC 12137 RepID=H0QM08_ARTGO
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
signal transduction histidine kinase LytS
13_1_40cm_4_scaffold_649_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

14538..14990
DNA (453bp) protein (151aa)
Putative GAF sensor protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HH02_ANADF
putative GAF sensor protein; K07170 GAF domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative GAF sensor protein
13_1_40cm_4_scaffold_649_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(14991..16295)
DNA (1305bp) protein (435aa)
ABC transporter related-protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIU4_9BACT
ABC transporter related-protein {ECO:0000313|EMBL:EEF60171.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" sour
taurine ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_649_17
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16292..18037)
DNA (1746bp) protein (582aa)
ABC transporter, inner membrane subunit n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IG76_ANADE
ABC transporter inner membrane subunit
ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ABC83585.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaer
13_1_40cm_4_scaffold_649_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18066..18923
DNA (858bp) protein (286aa)
Putative hydrolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S0_GEMAT
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAH37580.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 /
13_1_40cm_4_scaffold_649_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19128..19613
DNA (486bp) protein (162aa)
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III; K10773 endonuclease III [EC:4.2.99.18] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III (EC:3.2.2.- 4.2.99.18)
Endonuclease III n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASN5_RUBXD
13_1_40cm_4_scaffold_649_20
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

19666..20835
DNA (1170bp) protein (390aa)
amidohydrolase (EC:3.5.1.14); K01436 amidohydrolase [EC:3.5.1.-] Tax=RBG_16_RIF_WS3X_71_46_curated
amidohydrolase (EC:3.5.1.14)
Amidohydrolase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CB03_SPHTD id=5225688 bin=16ft_combo_ws3_JS1 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_1_40cm_4_scaffold_649_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

20877..22859
DNA (1983bp) protein (661aa)
hypothetical protein; K06888 Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein; K06888 id=14630958 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_40cm_4_scaffold_649_22
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

22868..23824
DNA (957bp) protein (319aa)
aldo/keto reductase Tax=RBG_16_Planctomycetes_43_13_curated
Aldo/keto reductase family id=4834576 bin=GWC2_Ignavibacteria_56_12 species=Sinorhizobium fredii genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
voltage-gated potassium channel beta subunit family protein
13_1_40cm_4_scaffold_649_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

23827..24276
DNA (450bp) protein (150aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methanobrevibacter sp. AbM4 RepID=R9SMZ4_9EURY
peptidyl-prolyl cis-trans isomerase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
peptidyl-prolyl cis-trans isomerase
13_1_40cm_4_scaffold_649_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

24305..25441
DNA (1137bp) protein (379aa)
Putative uncharacterized protein n=1 Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CMZ2_ROBBH
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Protein of unknown function DUF2911
13_1_40cm_4_scaffold_649_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

25443..25859
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_649_26
Rheinheimera sp. A13L, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25861..26943
DNA (1083bp) protein (361aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Rheinheimera sp. A13L RepID=F7NSW8_9GAMM
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:EGM78997.1}; TaxID=506534 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" sour
beta-lactamase
13_1_40cm_4_scaffold_649_27
Nostoc sp. PCC 7120, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(26940..27749)
DNA (810bp) protein (270aa)
Alr3897 protein n=1 Tax=Nostoc sp. (strain PCC 7120 / UTEX 2576) RepID=Q8YQD6_NOSS1
hypothetical protein
Alr3897 protein {ECO:0000313|EMBL:BAB75596.1}; TaxID=103690 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain PCC 7120 / UTEX 2576).;"
13_1_40cm_4_scaffold_649_28
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(27829..28389)
DNA (561bp) protein (187aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein id=24599981 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
13_1_40cm_4_scaffold_649_29
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28412..30574)
DNA (2163bp) protein (721aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003601B49
Dipeptidyl carboxypeptidase II {ECO:0000313|EMBL:GAN45511.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizuga
peptidyl-dipeptidase Dcp
Displaying 29 items

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