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13_1_40cm_4_scaffold_678

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_678_1
unknown

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2..118
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_40cm_4_scaffold_678_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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118..840
DNA (723bp) protein (241aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQ11_9CHLR
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:EFH87596.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter
CDP-alcohol phosphatidyltransferase
13_1_40cm_4_scaffold_678_3
unknown

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863..1246
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_40cm_4_scaffold_678_4
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(1243..1779)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Gordonia sp. NB4-1Y RepID=M7ALU7_9ACTO
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
hypothetical protein
13_1_40cm_4_scaffold_678_5
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1776..2732)
DNA (957bp) protein (319aa)
Aminotransferase, class V n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FR6_MESSB
class V aminotransferase
Aminotransferase, class V {ECO:0000313|EMBL:ABG63759.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp
13_1_40cm_4_scaffold_678_6
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2914..3261
DNA (348bp) protein (116aa)
tRNA-binding protein n=2 Tax=Labrenzia RepID=U7GK46_9RHOB
tRNA-binding protein {ECO:0000313|EMBL:ERP98570.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
Non-chaperonin molecular chaperone ATPase
13_1_40cm_4_scaffold_678_7
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3287..4405
DNA (1119bp) protein (373aa)
Glutamate dehydrogenase n=2 Tax=Streptomyces clavuligerus RepID=E2PZ59_STRC2
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=443255 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain
glutamate dehydrogenase
13_1_40cm_4_scaffold_678_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(4406..4816)
DNA (411bp) protein (137aa)
CoA-binding domain protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WID1_GEOS8
Predicted CoA-binding protein {ECO:0000313|EMBL:CDM64460.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
CoA-binding domain-containing protein
13_1_40cm_4_scaffold_678_9
unknown

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4840..5286
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_40cm_4_scaffold_678_10
unknown

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5283..5444
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_40cm_4_scaffold_678_11
unknown

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5842..6180
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_4_scaffold_678_12
Thermoanaerobacterium xylanolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6274..6930)
DNA (657bp) protein (219aa)
Beta-lactamase domain protein n=1 Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BGI5_THEXL
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:AEF17447.1}; TaxID=858215 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoan
13_1_40cm_4_scaffold_678_13
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6927..7940)
DNA (1014bp) protein (338aa)
Peptidase M24 n=1 Tax=Thermincola potens (strain JR) RepID=D5X7L1_THEPJ
peptidase M24
Peptidase M24 {ECO:0000313|EMBL:ADG82581.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
13_1_40cm_4_scaffold_678_14
unknown

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comp(8005..8502)
DNA (498bp) protein (166aa)

This feature has no annotations

13_1_40cm_4_scaffold_678_15
unknown

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8639..9622
DNA (984bp) protein (328aa)

This feature has no annotations

13_1_40cm_4_scaffold_678_16
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9624..10103)
DNA (480bp) protein (160aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal pep
Lipoprotein signal peptidase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3L6_9FIRM
lipoprotein signal peptidase
13_1_40cm_4_scaffold_678_17
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10168..10728)
DNA (561bp) protein (187aa)
Isochorismatase hydrolase n=1 Tax=Streptomyces auratus AGR0001 RepID=J2JQ68_9ACTO
Isochorismatase hydrolase {ECO:0000313|EMBL:EJJ02538.1}; TaxID=1160718 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
isochorismatase hydrolase
13_1_40cm_4_scaffold_678_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10805..11530)
DNA (726bp) protein (242aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_678_19
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(11530..12096)
DNA (567bp) protein (189aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B1X2_HERA2
putative RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Anaero_02
ECF subfamily RNA polymerase sigma-24 factor
13_1_40cm_4_scaffold_678_20
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(12267..13226)
DNA (960bp) protein (320aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] id=14632058 bin=bin9_gal15 species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
selenide, water dikinase
13_1_40cm_4_scaffold_678_21
unknown

Not on your lists

13373..13813
DNA (441bp) protein (147aa)

This feature has no annotations

13_1_40cm_4_scaffold_678_22

Not on your lists

13844..14569
DNA (726bp) protein (242aa)
Marine sediment metagenome DNA, contig: S01H1_S35489 {ECO:0000313|EMBL:GAG46798.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Putative uncharacterized protein id=1864710 bin=GWE2_Clostridiales_32_10 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
beta-lactamase domain-containing protein
13_1_40cm_4_scaffold_678_23
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(14514..17030)
DNA (2517bp) protein (839aa)
Transglutaminase domain-containing protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IE35_9CHLR
Transglutaminase domain-containing protein {ECO:0000313|EMBL:EFO80549.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochlori
transglutaminase domain-containing protein
13_1_40cm_4_scaffold_678_24
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(17017..18216)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AW33_HERA2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX03271.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantia
13_1_40cm_4_scaffold_678_25

Not on your lists

comp(18228..19214)
DNA (987bp) protein (329aa)
Methanol dehydrogenase regulatory protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1AIE1_9ZZZZ
Methanol dehydrogenase regulatory protein {ECO:0000313|EMBL:EQD41755.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage me
ATPase
13_1_40cm_4_scaffold_678_26
unknown

Not on your lists

comp(19293..19697)
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_40cm_4_scaffold_678_27
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(19720..20427)
DNA (708bp) protein (236aa)
hypothetical protein; K07150 Tax=RBG_16_Chloroflexi_51_16_curated
hypothetical protein; K07150 id=1244453 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
13_1_40cm_4_scaffold_678_28
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(20460..20789)
DNA (330bp) protein (110aa)
hypothetical protein Tax=RBG_16_RIF_CHLX_72_14_curated
Putative uncharacterized protein id=3311649 bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_40cm_4_scaffold_678_29
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(20786..21394)
DNA (609bp) protein (203aa)
tmk; thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=CG_Anaero_03
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2B8_SPHTD
13_1_40cm_4_scaffold_678_30

Not on your lists

comp(21423..22406)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PHC3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH75861.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
single-stranded nucleic acid binding R3H domain-containing protein
Displaying 30 items

View Taxonomy