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13_1_40cm_4_scaffold_68

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_68_1
unknown

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1..318
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_40cm_4_scaffold_68_2
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(315..842)
DNA (528bp) protein (176aa)
Putative THUMP domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN99_NITGG
THUMP domain-containing protein Tax=RBG_13_Bathyarchaeota_38_9_curated
putative THUMP domain protein
13_1_40cm_4_scaffold_68_3
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(861..1487)
DNA (627bp) protein (209aa)
Universally conserved protein n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BKW2_HYPBU
hypothetical protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_4_scaffold_68_4
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

1550..2494
DNA (945bp) protein (315aa)
asnA-2; L-asparagine amidohydrolase (EC:3.5.1.1); K13051 beta-aspartyl-peptidase (threonine type) [EC:3.4.19.5] Tax=RBG_16_Archaea_50_20_curated
Peptidase T2, asparaginase 2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU95_KORVE
peptidase T2, asparaginase 2
13_1_40cm_4_scaffold_68_5
unknown

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comp(2346..2687)
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_40cm_4_scaffold_68_6
unknown

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2883..4373
DNA (1491bp) protein (497aa)

This feature has no annotations

13_1_40cm_4_scaffold_68_7
RBG_16_Archaea_50_20_curated, Archaea

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4466..5242
DNA (777bp) protein (259aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I7G5_METCZ
multidrug ABC transporter ATPase Tax=RBG_16_Archaea_50_20_curated
multidrug ABC transporter ATPase
13_1_40cm_4_scaffold_68_8
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

5239..6897
DNA (1659bp) protein (553aa)
Putative permease (DUF2074) n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I7G4_METCZ
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
permease
13_1_40cm_4_scaffold_68_9
unknown

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7097..7432
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_4_scaffold_68_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7588..7818
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJI8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59353.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_68_11
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(8337..9083)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000361E1A4
uracil-DNA glycosylase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
uracil-DNA glycosylase superfamily
13_1_40cm_4_scaffold_68_12
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(9056..10174)
DNA (1119bp) protein (373aa)
Hypothetical conserved protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3B4_9ARCH
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_40cm_4_scaffold_68_13
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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10281..11195
DNA (915bp) protein (305aa)
Hypothetical conserved protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3B3_9ARCH
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_4_scaffold_68_14
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11221..11808)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003653462
rhodanese domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
thiosulfate sulfurtransferase
13_1_40cm_4_scaffold_68_15
RBG_16_Archaea_50_20_curated, Archaea

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comp(12035..12688)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI0003696103
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_4_scaffold_68_16
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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12926..13729
DNA (804bp) protein (268aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterine
thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EK54_9CHLR
13_1_40cm_4_scaffold_68_17
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(13940..15187)
DNA (1248bp) protein (416aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_68_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(15208..16944)
DNA (1737bp) protein (579aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_4_scaffold_68_19
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

17044..18114
DNA (1071bp) protein (357aa)
hypothetical protein; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=CG_PER_01
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036F468D
hypothetical protein
13_1_40cm_4_scaffold_68_20
unknown

Not on your lists

comp(18125..18367)
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_4_scaffold_68_21
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(18364..19389)
DNA (1026bp) protein (342aa)
Putative glycosyl transferase, family 4 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDG1_NITGG
glycosyl transferase Tax=RBG_13_Bathyarchaeota_38_9_curated
glycosyl transferase, family 4
13_1_40cm_4_scaffold_68_22
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

19481..20878
DNA (1398bp) protein (466aa)
glycine dehydrogenase subunit 1 (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] Tax=RBG_16_Archaea_50_20_curated
glycine dehydrogenase (EC:1.4.4.2)
Glycine dehydrogenase (Decarboxylating) n=1 Tax=Desulfurococcus fermentans DSM 16532 RepID=I3XRJ5_9CREN
13_1_40cm_4_scaffold_68_23
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

20878..22461
DNA (1584bp) protein (528aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2) Tax=RBG_16_Bathyarchaeota_48_13_curated
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZMA3_THELI
13_1_40cm_4_scaffold_68_24
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

22465..23661
DNA (1197bp) protein (399aa)
Cell division protein FtsZ n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1L0U2_9EURY
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RBG_16_Bathyarchaeota_48_13_curated
cell division protein FtsZ
13_1_40cm_4_scaffold_68_25
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(23671..24315)
DNA (645bp) protein (215aa)
PHP domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GW18_METFV
php domain protein; K07053 Tax=RBG_16_Archaea_50_20_curated
php domain-containing protein
13_1_40cm_4_scaffold_68_26
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(24272..25828)
DNA (1557bp) protein (519aa)
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RBG_16_Archaea_50_20_curated
Methionine--tRNA ligase n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EE63_PYRF1
methionyl-tRNA synthetase
13_1_40cm_4_scaffold_68_27
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

26059..26478
DNA (420bp) protein (140aa)
Translation initiation factor 2 subunit beta n=2 Tax=Methanothermobacter RepID=D9PUQ0_METTM
eIF2B; translation initiation factor aIF-2, beta subunit; K03238 translation initiation factor 2 subunit 2 Tax=RBG_16_Archaea_50_20_curated
eIF2B; translation initiation factor aIF-2, beta subunit
13_1_40cm_4_scaffold_68_28
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

26561..26788
DNA (228bp) protein (76aa)
Conserved archaeal protein n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BLR7_HYPBU
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_4_scaffold_68_29
unknown

Not on your lists

comp(26994..27149)
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_40cm_4_scaffold_68_30
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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27424..28017
DNA (594bp) protein (198aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GK32_METPE
isoprenylcysteine carboxyl methyltransferase
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:ACL17103.1}; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" so
Displaying 30 items

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