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13_1_40cm_4_scaffold_6869

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6869_1
unknown

Not on your lists

comp(3..149)
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_40cm_4_scaffold_6869_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(220..963)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI00037196D3
anti-sigma-K factor RskA Tax=RBG_16_Acidobacteria_70_10_curated
hypothetical protein
13_1_40cm_4_scaffold_6869_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(960..1565)
DNA (606bp) protein (202aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3R5_GEMAT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG93808.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_6869_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1670..2392)
DNA (723bp) protein (241aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Signal peptidase I n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LVW5_HIPMA
signal peptidase I
13_1_40cm_4_scaffold_6869_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2470..2787
DNA (318bp) protein (106aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_6869_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

2784..4826
DNA (2043bp) protein (681aa)
cbbT; transketolase (TK) (EC:2.2.1.1) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Transketolase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKA2_9BACT
transketolase
13_1_40cm_4_scaffold_6869_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4860..5963)
DNA (1104bp) protein (368aa)
hemY2; hypothetical protein; K00231 oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y491_SORCE
hypothetical protein
13_1_40cm_4_scaffold_6869_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5954..6871)
DNA (918bp) protein (306aa)
ferrochelatase (EC:4.99.1.1); K01772 ferrochelatase [EC:4.99.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFF6_9CHLR
13_1_40cm_4_scaffold_6869_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6861..7832)
DNA (972bp) protein (324aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCL2_9BACT
13_1_40cm_4_scaffold_6869_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7876..8175)
DNA (300bp) protein (100aa)
cld2; chlorite dismutase (EC:1.13.11.49); K09162 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase id=14430160 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
Rieske (2Fe-2S) domain-containing protein
13_1_40cm_4_scaffold_6869_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8136..8927)
DNA (792bp) protein (264aa)
cld2; chlorite dismutase (EC:1.13.11.49); K09162 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cld2; chlorite dismutase (EC:1.13.11.49)
chlorite dismutase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC35
13_1_40cm_4_scaffold_6869_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(9145..9333)
DNA (189bp) protein (63aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_6869_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(9343..10194)
DNA (852bp) protein (284aa)
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Protoheme IX farnesyltransferase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQ28_SINAD
protoheme IX farnesyltransferase
13_1_40cm_4_scaffold_6869_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10188..10463)
DNA (276bp) protein (92aa)
caa(3)-type oxidase, subunit IV Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Caa(3)-type oxidase, subunit IV id=1881831 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
caa(3)-type oxidase, subunit IV
13_1_40cm_4_scaffold_6869_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10476..11153)
DNA (678bp) protein (226aa)
ctaE; putative transmembrane cytochrome oxidase subunit; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Cytochrome c oxidase subunit III id=1881833 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ctaE; putative transmembrane cytochrome oxidase subunit
13_1_40cm_4_scaffold_6869_16
unknown

Not on your lists

comp(11175..11297)
DNA (123bp) protein (41aa)

This feature has no annotations

13_1_40cm_4_scaffold_6869_17
unknown

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12081..12236
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_40cm_4_scaffold_6869_18
GWA2_Methylomirabilis_73_35, GWA2_Methylomirabilis_73_35, GWA2_Methylomirabilis_73_35, GWA2_Methylomirabilis_73_35, Methylomirabilis, Bacteria

Not on your lists

12348..12575
DNA (228bp) protein (76aa)
Cytochrome oxidase subunit 1 (Fragment) id=4083682 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Penicillium taxon_order=Eurotiales taxon_class=Eurotiomycetes phylum=Ascomycota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Cytochrome oxidase subunit 1 (Fragment) id=4083682 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Penicillium taxon_order=Eurotiales taxon_class=Eurotiomycetes phylum=Ascomycota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_6869_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(12829..13500)
DNA (672bp) protein (224aa)
heme/copper-type cytochrome/quinol oxidases subunit 2 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative cytochrome c oxidase, subunit II id=1881842 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
heme/copper-type cytochrome/quinol oxidases subunit 2
13_1_40cm_4_scaffold_6869_20
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(13520..14113)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B5F0A6
hypothetical protein Tax=RBG_16_Armatimonadetes_67_12_curated
hypothetical protein
13_1_40cm_4_scaffold_6869_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(14246..14701)
DNA (456bp) protein (152aa)
putative cytochrome c Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative (Diheme) protein id=3202767 bin=GWC2_Methylomirabilis_70_16 species=endosymbiont of Tevnia jerichonana genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative cytochrome c
13_1_40cm_4_scaffold_6869_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(15783..16607)
DNA (825bp) protein (275aa)
Putative (Diheme) protein id=4083690 bin=GWA2_Methylomirabilis_73_35 species=endosymbiont of Tevnia jerichonana genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_6869_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16604..17413)
DNA (810bp) protein (270aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Nitric oxide reductase, cytochrome c-containing subunit id=4821309 bin=GWC2_Syntrophobacterales_56_13 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_40cm_4_scaffold_6869_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17400..19031)
DNA (1632bp) protein (544aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein id=14429058 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Displaying 24 items

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