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13_1_40cm_4_scaffold_713

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_713_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

3..1238
DNA (1236bp) protein (412aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_713_2
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

comp(1235..1669)
DNA (435bp) protein (145aa)
N utilization substance protein B homolog n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMC8_9CHLR id=1241624 bin=RBG2 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
nusB; antitermination protein NusB; K03625 N utilization substance protein B Tax=RBG_16_Chloroflexi_64_43_curated
NusB antitermination factor
13_1_40cm_4_scaffold_713_3
Desulfosporosinus sp. HMP52, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1666..2661)
DNA (996bp) protein (332aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XYF6_9FIRM
phosphate:acyl-(acyl carrier protein) acyltransferase
13_1_40cm_4_scaffold_713_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2927..3469)
DNA (543bp) protein (181aa)
hypothetical protein; K07040 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein; K07040 uncharacterized protein id=14628950 bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
13_1_40cm_4_scaffold_713_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3490..3969)
DNA (480bp) protein (160aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ATPase subunit H id=14628949 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
vacuolar-type H+-ATPase subunit H
13_1_40cm_4_scaffold_713_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3971..4537)
DNA (567bp) protein (189aa)
putative Ribosomal RNA small subunit methyltransferase D (EC:2.1.1.52) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
methyltransferase (methylase) (EC:2.1.1.-)
Methyltransferase id=3362964 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_713_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(4534..6561)
DNA (2028bp) protein (676aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2A2_THERP
13_1_40cm_4_scaffold_713_8
unknown

Not on your lists

6627..6830
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_4_scaffold_713_9
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(6803..8314)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I8N9_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM01627.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
13_1_40cm_4_scaffold_713_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

8461..8667
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_713_11
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

8764..9978
DNA (1215bp) protein (405aa)
Major facilitator superfamily MFS_1 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023N9_SOLUE
major facilitator transporter Tax=RBG_16_RIF_CHLX_70_13_curated
major facilitator transporter
13_1_40cm_4_scaffold_713_12
RIFOXYA1_FULL_OP11_Woesebacteria_43_9_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(9954..10454)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI000382E8DB
NUDIX hydrolase Tax=RIFOXYA1_FULL_OP11_Woesebacteria_43_9_curated
NUDIX hydrolase
13_1_40cm_4_scaffold_713_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10451..11524)
DNA (1074bp) protein (358aa)
radical SAM enzyme, Cfr family; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rlmN2; ribosomal RNA large subunit methyltransferase N 2 (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L357_SIMNZ
13_1_40cm_4_scaffold_713_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(11548..12465)
DNA (918bp) protein (306aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SDX3_9CHLR
13_1_40cm_4_scaffold_713_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(12483..13103)
DNA (621bp) protein (207aa)
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
peptide deformylase (EC:3.5.1.88)
peptide deformylase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4E07A
13_1_40cm_4_scaffold_713_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(13100..15301)
DNA (2202bp) protein (734aa)
primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Primosomal protein N' n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKV5_DESK7
primosomal protein N'
13_1_40cm_4_scaffold_713_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(15298..15867)
DNA (570bp) protein (190aa)
gmk; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PYC9_9FIRM
13_1_40cm_4_scaffold_713_18
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15891..16838)
DNA (948bp) protein (316aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=429009 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacter
Pseudouridine synthase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8S0_AMMDK
RluA family pseudouridine synthase
13_1_40cm_4_scaffold_713_19
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(16839..17333)
DNA (495bp) protein (165aa)
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36] Tax=RBG_16_RIF_CHLX_69_14_curated
Lipoprotein signal peptidase id=3811408 bin=GWC2_Chloroflexi_73_18 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
lspA; lipoprotein signal peptidase
13_1_40cm_4_scaffold_713_20
Geobacillus thermoleovorans, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17336..18085)
DNA (750bp) protein (250aa)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Geobacillus thermoleovorans CCB_US3_UF5 RepID=G8N184_GEOTH
3-oxoacyl-ACP reductase
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:AEV18692.1}; TaxID=1111068 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus; Geobacillus thermoleovorans group.
13_1_40cm_4_scaffold_713_21
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18112..18474)
DNA (363bp) protein (121aa)
Uncharacterized protein {ECO:0000313|EMBL:EWY40624.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella sti
hypothetical protein
13_1_40cm_4_scaffold_713_22
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(18562..19797)
DNA (1236bp) protein (412aa)
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJD6_THEM7
13_1_40cm_4_scaffold_713_23
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(19794..21359)
DNA (1566bp) protein (522aa)
malonyl CoA-acyl carrier protein transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8C2_SPHTD
malonyl CoA-acyl carrier protein transacylase
13_1_40cm_4_scaffold_713_24
unknown

Not on your lists

comp(21442..22086)
DNA (645bp) protein (215aa)

This feature has no annotations

13_1_40cm_4_scaffold_713_25
unknown

Not on your lists

comp(22096..22281)
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_4_scaffold_713_26
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

22334..22657
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQA9_9CHLR id=1244707 bin=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
sensor-like histidine kinase Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
13_1_40cm_4_scaffold_713_27
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(22654..25788)
DNA (3135bp) protein (1045aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Isoleucyl-tRNA synthetase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CG38_THET1
isoleucyl-tRNA synthetase
13_1_40cm_4_scaffold_713_28
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

Not on your lists

comp(26061..26567)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Nocardiopsis gilva RepID=UPI0003452D51
hypothetical protein Tax=RBG_13_Chloroflexi_60_13_curated
activator of Hsp90 ATPase 1 family protein
13_1_40cm_4_scaffold_713_29
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26551..26709)
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Gracilibacillus lacisalsi RepID=UPI000378E76D
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AGC48146.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;"
Displaying 29 items

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