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13_1_40cm_4_scaffold_72

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_72_1
CG_Caldi_01, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria

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1..585
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z0B0_METPS
nitrogenase subunit NifH (ATPase)-like protein Tax=CG_Caldi_01
hypothetical protein
13_1_40cm_4_scaffold_72_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(634..963)
DNA (330bp) protein (110aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U8G7_9CHLR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFH80178.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonoba
short-chain dehydrogenase/reductase SDR
13_1_40cm_4_scaffold_72_3

Not on your lists

comp(1522..1923)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000360BB2D
Marine sediment metagenome DNA, contig: S06H3_L01033 {ECO:0000313|EMBL:GAI16800.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_40cm_4_scaffold_72_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(1969..2241)
DNA (273bp) protein (91aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_72_5
unknown

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comp(2248..2853)
DNA (606bp) protein (202aa)

This feature has no annotations

13_1_40cm_4_scaffold_72_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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3056..3202
DNA (147bp) protein (49aa)
YHS domain protein id=2499750 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
copper-translocating P-type ATPase
13_1_40cm_4_scaffold_72_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3676..4293
DNA (618bp) protein (206aa)
Tetracycline efflux transporter n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7J5_9BACT id=5223809 bin=16ft_combo_ws3_JS1 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
tetA; tetracycline efflux transporter; K08151 MFS transporter, DHA1 family, tetracycline resistance protein Tax=RBG_16_RIF_WS3X_71_46_curated
tetA; tetracycline efflux transporter
13_1_40cm_4_scaffold_72_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4767..5840)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Thermococcus sp. CL1 RepID=I3ZSK4_9EURY
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_72_9
Mycobacterium triplex, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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6305..6574
DNA (270bp) protein (90aa)
Deazaflavin-dependent nitroreductase family protein n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0IZ97_MYCSM
Cell entry (Mce) related family protein {ECO:0000313|EMBL:CDO87677.1}; TaxID=47839 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium triple
deazaflavin-dependent nitroreductase family protein
13_1_40cm_4_scaffold_72_10
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(6623..7300)
DNA (678bp) protein (226aa)
dienelactone hydrolase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
Carboxymethylenebutenolidase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TV63_9CHLR
dienelactone hydrolase
13_1_40cm_4_scaffold_72_11
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(8460..9281)
DNA (822bp) protein (274aa)
Amidohydrolase 2 n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6XB57_CELAD
amidohydrolase 2 Tax=GWA2_RIF03_38_11_curated
amidohydrolase
13_1_40cm_4_scaffold_72_12
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(9484..10182)
DNA (699bp) protein (233aa)
Putative aminoacrylate hydrolase RutD n=1 Tax=Streptomyces afghaniensis 772 RepID=S4MCB1_9ACTO
Putative aminoacrylate hydrolase RutD {ECO:0000313|EMBL:EPJ37138.1}; TaxID=1283301 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghanie
putative hydrolase or acyltransferase
13_1_40cm_4_scaffold_72_13

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comp(10858..11499)
DNA (642bp) protein (214aa)
bifunctional deaminase-reductase domain-containing protein id=5085530 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Bifunctional deaminase-reductase domain-containing protein {ECO:0000313|EMBL:KKS95262.1}; TaxID=1618443 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011
RibD C-terminal domain
13_1_40cm_4_scaffold_72_14
GWB1_OP11_43_11, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

11813..12475
DNA (663bp) protein (221aa)
Tax=GWB1_OP11_43_11
13_1_40cm_4_scaffold_72_15
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(12694..13836)
DNA (1143bp) protein (381aa)
putative L-lysine 6-dehydrogenase Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
cap:CLDAP_29660 putative L-lysine 6-dehydrogenase id=8266064 bin=CD_OP8_4m species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
saccharopine dehydrogenase
13_1_40cm_4_scaffold_72_16
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

13931..14245
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Brevibacillus RepID=J3BBL3_9BACL
hypothetical protein Tax=RBG_16_Chloroflexi_48_8_curated
hypothetical protein
13_1_40cm_4_scaffold_72_17
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

comp(14249..15277)
DNA (1029bp) protein (343aa)
UPI0003D1AA2F related cluster n=1 Tax=unknown RepID=UPI0003D1AA2F
geranylgeranyl reductase Tax=RBG_13_Bathyarchaeota_52_12_curated
geranylgeranyl reductase
13_1_40cm_4_scaffold_72_18
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(15454..15966)
DNA (513bp) protein (171aa)
Transcription elongation factor NusA n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TXG0_METKA
nusA; transcription elongation factor NusA-like protein Tax=RBG_16_Archaea_50_20_curated
nusA; transcription elongation factor NusA-like protein
13_1_40cm_4_scaffold_72_19
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16231..16794
DNA (564bp) protein (188aa)
Putative uncharacterized protein id=4964974 bin=GWA2_Bacteroidetes_42_15 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
13_1_40cm_4_scaffold_72_20
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

16872..18011
DNA (1140bp) protein (380aa)
succinyl-CoA synthetase subunit beta; K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Succinyl-CoA synthetase beta chain n=1 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A048_FERFK
succinyl-CoA synthetase subunit beta
13_1_40cm_4_scaffold_72_21
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

18012..18893
DNA (882bp) protein (294aa)
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] Tax=RBG_13_Bathyarchaeota_46_16b_curated
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=Q9YD40_AERPE
13_1_40cm_4_scaffold_72_22
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(19108..19908)
DNA (801bp) protein (267aa)
putative ribosomal RNA small subunit methyltransferase A; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RBG_16_Archaea_50_20_curated
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WL84_METH6
putative ribosomal RNA small subunit methyltransferase A
13_1_40cm_4_scaffold_72_23
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(19913..20389)
DNA (477bp) protein (159aa)
DNA-binding protein n=2 Tax=Pyrococcus furiosus RepID=I6V3M6_9EURY
DNA-binding protein; K07572 putative nucleotide binding protein Tax=RBG_16_Archaea_50_20_curated
DNA-binding protein
13_1_40cm_4_scaffold_72_24
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(20648..20977)
DNA (330bp) protein (110aa)
RNA polymerase Rpb4; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6] Tax=RBG_16_Archaea_50_20_curated
DNA-directed RNA polymerase, subunit F (EC:2.7.7.6)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI000364BA4E
13_1_40cm_4_scaffold_72_25
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(20979..21275)
DNA (297bp) protein (99aa)
50S ribosomal protein L21e n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BNB3_HYPBU
50S ribosomal protein L21; K02889 large subunit ribosomal protein L21e Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L21e
13_1_40cm_4_scaffold_72_26
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

21349..22395
DNA (1047bp) protein (349aa)
methyltransferase-like protein; K07446 tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213] Tax=RBG_13_Bathyarchaeota_46_16b_curated
tRNA (guanine(10)-N2)-dimethyltransferase n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=TMG10_METTH
methyltransferase-like protein
13_1_40cm_4_scaffold_72_27
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

22396..23316
DNA (921bp) protein (307aa)
ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=uncultured archaeon GZfos26D6 RepID=Q64C36_9ARCH
ribonuclease Z Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_4_scaffold_72_28
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(23341..23625)
DNA (285bp) protein (95aa)
UPF0201 protein VMUT_1750 n=1 Tax=Vulcanisaeta moutnovskia (strain 768-28) RepID=F0QUW9_VULM7
hypothetical protein
UPF0201 protein Vdis_0900 {ECO:0000256|HAMAP-Rule:MF_01112}; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanisaeta.;" source="Vulcanisaeta distrib
13_1_40cm_4_scaffold_72_29
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(23751..24308)
DNA (558bp) protein (186aa)
UPF0200 protein Hbut_0338 n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=Y338_HYPBU
dephospho-CoA kinase, CoaE Tax=RBG_13_Bathyarchaeota_38_9_curated
dephospho-CoA kinase, CoaE
13_1_40cm_4_scaffold_72_30
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

24488..24955
DNA (468bp) protein (156aa)
LigT; 2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RBG_13_Bathyarchaeota_38_9_curated
ligT; 2'-5' RNA ligase (EC:6.5.1.-)
UPF0097 protein APE_1792 n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=Y1792_AERPE
Displaying items 1-30 of 37 in total

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