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13_1_40cm_4_scaffold_70

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_70_1

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219..425
DNA (207bp) protein (69aa)
Transcription antitermination protein NusG (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BE69_9ZZZZ
Transcription antitermination protein NusG {ECO:0000313|EMBL:EQD71221.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage m
13_1_40cm_4_scaffold_70_2
CSP1_5_NC10, NC10, Bacteria

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560..1222
DNA (663bp) protein (221aa)
response regulator receiver/ANTAR domain-containing protein id=14429095 bin=bin3_NC10 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
response regulator receiver/ANTAR domain-containing protein Tax=CSP1_5_NC10
response regulator receiver/ANTAR domain-containing protein
13_1_40cm_4_scaffold_70_3
unknown

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1262..1573
DNA (312bp) protein (104aa)

This feature has no annotations

13_1_40cm_4_scaffold_70_4
unknown

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1601..1693
DNA (93bp) protein (31aa)

This feature has no annotations

13_1_40cm_4_scaffold_70_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(1836..3077)
DNA (1242bp) protein (414aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLV2_9CHLR
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFH86752.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonoba
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_40cm_4_scaffold_70_6
RBG_13_RIF_OD1_08_41_18_curated, RIF-OD1-8, Parcubacteria, Bacteria

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comp(3074..4327)
DNA (1254bp) protein (418aa)
ATP-grasp enzyme-like protein Tax=RBG_13_RIF_OD1_08_41_18_curated
Putative uncharacterized protein id=2268983 bin=GWB2_Proteobacteria_55_19 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
ATP-grasp enzyme-like protein
13_1_40cm_4_scaffold_70_7
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

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4927..5565
DNA (639bp) protein (213aa)
Transcription antitermination protein NusG (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BE69_9ZZZZ
NusG antitermination factor Tax=RBG_13_Nitrospirae_41_22_curated
transcription antitermination protein
13_1_40cm_4_scaffold_70_8
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

5629..7179
DNA (1551bp) protein (517aa)
Polysaccharide chain length determinant protein n=2 Tax=Geobacter metallireducens RepID=Q39VP4_GEOMG
lipopolysaccharide biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
chain-length determining protein
13_1_40cm_4_scaffold_70_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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7221..8057
DNA (837bp) protein (279aa)
Tyrosine-protein kinase EpsD n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RQZ5_9CLOT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
chromosome partitioning ATPase
13_1_40cm_4_scaffold_70_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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8057..9661
DNA (1605bp) protein (535aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035E7E4D
sugar transferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_40cm_4_scaffold_70_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

9706..11052
DNA (1347bp) protein (449aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K13015 UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.-] id=24479472 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K13015 UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.-] Tax=RBG_16_RIF_WS3X_71_46_curated
nucleotide sugar dehydrogenase
13_1_40cm_4_scaffold_70_12
unknown

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11059..11526
DNA (468bp) protein (156aa)

This feature has no annotations

13_1_40cm_4_scaffold_70_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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11629..13002
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q457_9RHOO
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_40cm_4_scaffold_70_14
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

12999..14288
DNA (1290bp) protein (430aa)
Glycosyl transferase group 1 n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UIP8_ANASK
group 1 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
group 1 glycosyl transferase
13_1_40cm_4_scaffold_70_15
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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14288..15676
DNA (1389bp) protein (463aa)
Membrane bound O-acyl transferase MBOAT family protein id=3889652 bin=GWA2__Bacteriovorax-rel_49_15 species=Deinococcus maricopensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
membrane bound O-acyl transferase MBOAT family protein Tax=GWA2_Bdellovibrionales_49_15_curated
membrane bound O-acyl transferase MBOAT family protein
13_1_40cm_4_scaffold_70_16
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

15784..16872
DNA (1089bp) protein (363aa)
hypothetical protein id=3889570 bin=GWA2__Bacteriovorax-rel_49_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWA2_Bdellovibrionales_49_15_curated
13_1_40cm_4_scaffold_70_17
unknown

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16969..17130
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_40cm_4_scaffold_70_18
CG_Elusi_04, Elusimicrobia, Bacteria

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17159..18220
DNA (1062bp) protein (354aa)
hypothetical protein Tax=CG_Elusi_04
Putative uncharacterized protein id=3368034 bin=GWA2_Elusimicrobia_66_18 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
13_1_40cm_4_scaffold_70_19
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

18238..18627
DNA (390bp) protein (130aa)
asparagine synthase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_40cm_4_scaffold_70_20
unknown

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18621..19607
DNA (987bp) protein (329aa)

This feature has no annotations

13_1_40cm_4_scaffold_70_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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20182..21285
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036CA46F
Glycosyltransferase {ECO:0000313|EMBL:CDM66251.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
glycosyl transferase family 1
13_1_40cm_4_scaffold_70_22
unknown

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21354..21872
DNA (519bp) protein (173aa)

This feature has no annotations

13_1_40cm_4_scaffold_70_23
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

22134..23714
DNA (1581bp) protein (527aa)
Polysaccharide biosynthesis protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H753_ANADF
polysaccharide biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
polysaccharide biosynthesis protein
13_1_40cm_4_scaffold_70_24
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23737..25050
DNA (1314bp) protein (438aa)
glycosyl transferase family 1 protein (EC:2.4.1.-)
Group 1 glycosyl transferase n=1 Tax=Thauera phenylacetica B4P RepID=N6ZX81_9RHOO
Group 1 glycosyl transferase {ECO:0000313|EMBL:ENO98908.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica
Displaying 24 items

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