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13_1_40cm_4_scaffold_700

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_700_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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1..702
DNA (702bp) protein (234aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_700_2
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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881..1879
DNA (999bp) protein (333aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q8S8_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU70343.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora ac
13_1_40cm_4_scaffold_700_3
unknown

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1869..3029
DNA (1161bp) protein (387aa)

This feature has no annotations

13_1_40cm_4_scaffold_700_4
unknown

Not on your lists

comp(3058..4542)
DNA (1485bp) protein (495aa)

This feature has no annotations

13_1_40cm_4_scaffold_700_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(4629..4790)
DNA (162bp) protein (54aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_700_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4872..5861
DNA (990bp) protein (330aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase id=4803694 bin=GWC2_Chloroflexi_73_18 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_4_scaffold_700_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5873..8464
DNA (2592bp) protein (864aa)
Protein translocase subunit SecA n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KY62_THERP
protein translocase subunit secA; K03070 preprotein translocase subunit SecA Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
secA; Preprotein translocase subunit SecA
13_1_40cm_4_scaffold_700_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

8489..9289
DNA (801bp) protein (267aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4S3_THERP
13_1_40cm_4_scaffold_700_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

9250..10095
DNA (846bp) protein (282aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GLQ2_9CYAN
13_1_40cm_4_scaffold_700_10
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

10116..11027
DNA (912bp) protein (304aa)
Putative nucleoside-diphosphate sugar epimerase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KK97_9FIRM
NAD-dependent epimerase/dehydratase Tax=RBG_16_RIF_CHLX_69_14_curated
putative nucleoside-diphosphate sugar epimerase
13_1_40cm_4_scaffold_700_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11200..11397
DNA (198bp) protein (66aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_700_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11774..12526
DNA (753bp) protein (251aa)
peptide chain release factor 2; K02836 peptide chain release factor 2 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Peptide chain release factor 2 id=4803703 bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
peptide chain release factor 2
13_1_40cm_4_scaffold_700_13
unknown

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12563..12901
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_4_scaffold_700_14
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(12898..14253)
DNA (1356bp) protein (452aa)
Putative domain HDIG-containing protein id=4952081 bin=GWC2_Chloroflexi_73_18 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
polynucleotide adenylyltransferase/metal dependent phosphohydrolase Tax=GWC2_RIF_CHLX_73_18_curated
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
13_1_40cm_4_scaffold_700_15
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14277..14987)
DNA (711bp) protein (237aa)
amino acid ABC transporter ATPase n=1 Tax=Arthrobacter sp. 162MFSha1.1 RepID=UPI00036940A4
putative branched-chain amino acid transport, ATP-binding protein
Putative branched-chain amino acid transport, ATP-binding protein {ECO:0000313|EMBL:AIY03471.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source=
13_1_40cm_4_scaffold_700_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(14993..15802)
DNA (810bp) protein (270aa)
ABC transporter n=1 Tax=Micromonospora sp. CNB394 RepID=UPI00036E06DA
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ABC transporter-like protein
13_1_40cm_4_scaffold_700_17

Not on your lists

comp(15799..17007)
DNA (1209bp) protein (403aa)
Putative ABC-type branched-chain amino acid transport system, permease component n=1 Tax=mine drainage metagenome RepID=E6Q427_9ZZZZ
Putative ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:CBI01986.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" sou
ABC-type branched-chain amino acid transport system permease component
13_1_40cm_4_scaffold_700_18
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(17004..18056)
DNA (1053bp) protein (351aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RBG_16_RIF_CHLX_72_14_curated
Branched-chain amino acid ABC-type transport system permease component
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein id=14630238 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
13_1_40cm_4_scaffold_700_19
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(18125..19375)
DNA (1251bp) protein (417aa)
Extracellular ligand-binding receptor n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDL2_9CHLR
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EFH88357.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobact
extracellular ligand-binding receptor
13_1_40cm_4_scaffold_700_20
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19510..20055
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036C34FF
Secreted protein {ECO:0000313|EMBL:EON23575.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
13_1_40cm_4_scaffold_700_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

20213..20959
DNA (747bp) protein (249aa)
nth; endonuclease III (EC:4.2.99.18) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III (DNA-(Apurinic or apyrimidinic site) lyase) id=4153746 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_700_22
unknown

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comp(20853..21194)
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_40cm_4_scaffold_700_23
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(21553..21792)
DNA (240bp) protein (80aa)
Anti-sigma factor Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
anti-sigma factor
13_1_40cm_4_scaffold_700_24
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(21803..22102)
DNA (300bp) protein (100aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFG7_THET1
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_4_scaffold_700_25
unknown

Not on your lists

comp(22343..22840)
DNA (498bp) protein (166aa)

This feature has no annotations

13_1_40cm_4_scaffold_700_26
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23019..23375)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B6A4B7
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
13_1_40cm_4_scaffold_700_27
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

23556..23879
DNA (324bp) protein (108aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Transcriptional regulator, Crp/Fnr family id=4710542 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_40cm_4_scaffold_700_28
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(24063..25736)
DNA (1674bp) protein (558aa)
EmrB/QacA subfamily drug resistance transporter Tax=RBG_16_RIF_CHLX_72_14_curated
putative drug transport protein id=14630167 bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
EmrB/QacA subfamily drug resistance transporter
13_1_40cm_4_scaffold_700_29
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

25946..26632
DNA (687bp) protein (229aa)
Membrane protease subunit, stomatin/prohibitin n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A593_DESDJ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
membrane protease subunit, stomatin/prohibitin
13_1_40cm_4_scaffold_700_30
unknown

Not on your lists

26720..26902
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying items 1-30 of 40 in total

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