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13_1_40cm_4_scaffold_7026

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_7026_1
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1..444)
-----------------
DNA (444bp)
protein (148aa)
Putative NMT1/THI5-like protein id=4428906 bin=GWC2_Chloroflexi_73_18 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein Tax=GWC2_RIF_CHLX_73_18_curated
ABC transporter substrate binding protein
13_1_40cm_4_scaffold_7026_2
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(481..1260)
-----------------
DNA (780bp)
protein (260aa)
ABC transporter permease; K02050 NitT/TauT family transport system permease protein Tax=RBG_16_Actinobacteria_68_21_curated
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein id=14629053 bin=bin8_Chloro species=unknown genus=Ruegeria taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
putative ABC transporter permease protein
13_1_40cm_4_scaffold_7026_3
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1257..2063)
-----------------
DNA (807bp)
protein (269aa)
ABC transporter related protein id=4428908 bin=GWC2_Chloroflexi_73_18 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein Tax=GWC2_RIF_CHLX_73_18_curated
ABC transporter-like protein
13_1_40cm_4_scaffold_7026_4
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(2060..2899)
-----------------
DNA (840bp)
protein (280aa)
Putative ABC transporter permease protein id=4428909 bin=GWC2_Chloroflexi_73_18 species=Actinoplanes missouriensis genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ABC transporter permease; K02050 NitT/TauT family transport system permease protein Tax=GWC2_RIF_CHLX_73_18_curated
ABC transporter permease
13_1_40cm_4_scaffold_7026_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2932..3882
-----------------
DNA (951bp)
protein (317aa)
putative F420-dependent oxidoreductase, Rv1855c family Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Luciferase-like monooxygenase superfamily id=4757030 bin=GWC2_Chloroflexi_73_18 species=Halosarcina pallida genus=Halosarcina taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
luciferase-like monooxygenase
13_1_40cm_4_scaffold_7026_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

3912..5030
-----------------
DNA (1119bp)
protein (373aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2); K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
NAD(P) transhydrogenase subunit alpha n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5ST64_9BACT
NAD/NADP transhydrogenase alpha subunit
13_1_40cm_4_scaffold_7026_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5027..5326
-----------------
DNA (300bp)
protein (100aa)
NAD(P) transhydrogenase subunit alpha; K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
NAD(P) transhydrogenase subunit alpha n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PYS3_STANL
NAD(P) transhydrogenase subunit alpha
13_1_40cm_4_scaffold_7026_8
unknown

Not on your lists

comp(5295..5453)
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

13_1_40cm_4_scaffold_7026_9
unknown

Not on your lists

comp(5544..5750)
-----------------
DNA (207bp)
protein (69aa)

This feature has no annotations

13_1_40cm_4_scaffold_7026_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6004..6726
-----------------
DNA (723bp)
protein (241aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2); K00325 NAD(P) transhydrogenase subunit beta [EC:1.6.1.2] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
NAD(P) transhydrogenase subunit beta n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C562_SPHTD
13_1_40cm_4_scaffold_7026_11
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6755..7387
-----------------
DNA (633bp)
protein (211aa)
nitrile hydratase subunit alpha (EC:4.2.1.84)
nthA; nitrile hydratase subunit alpha Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Cobalt-containing nitrile hydratase subunit alpha id=4793524 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_7026_12
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7384..8040
-----------------
DNA (657bp)
protein (219aa)
nitrile hydratase (EC:4.2.1.84); K01721 nitrile hydratase [EC:4.2.1.84] Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
nthB; nitrile hydratase beta subunit (EC:4.2.1.84)
Nitrile hydratase, beta subunit n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QSK1_9ENTR
13_1_40cm_4_scaffold_7026_13
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8018..8389
-----------------
DNA (372bp)
protein (124aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. SJ98 RepID=K8RAD4_9BURK
hypothetical protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
hypothetical protein
13_1_40cm_4_scaffold_7026_14
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8784..9605)
-----------------
DNA (822bp)
protein (274aa)
DNA-(Apurinic or apyrimidinic site) lyase {ECO:0000313|EMBL:ABS25929.1}; EC=4.2.99.18 {ECO:0000313|EMBL:ABS25929.1};; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales;
DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HB33_ANADF
DNA-(apurinic or apyrimidinic site) lyase
13_1_40cm_4_scaffold_7026_15
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9612..13886)
-----------------
DNA (4275bp)
protein (1425aa)
DEAD/H associated domain protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J717_ANAD2
DEAD/H associated domain protein {ECO:0000313|EMBL:ACL65207.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxoba
DEAD/DEAH box helicase
13_1_40cm_4_scaffold_7026_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14059..14970
-----------------
DNA (912bp)
protein (304aa)
Luciferase-like monooxygenase id=4194185 bin=GWC2_Methylomirabilis_70_24 species=Rhodococcus triatomae genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
luciferase-like monooxygenase Tax=GWA2_Rokubacteria_70_23_curated
5,10-methylenetetrahydromethanopterin reductase
13_1_40cm_4_scaffold_7026_17
unknown

Not on your lists

comp(14967..15524)
-----------------
DNA (558bp)
protein (186aa)

This feature has no annotations

13_1_40cm_4_scaffold_7026_18
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(15539..15982)
-----------------
DNA (444bp)
protein (148aa)
DinB family protein n=1 Tax=Streptomyces chartreusis RepID=UPI000262EE1E
DinB family protein Tax=RBG_16_Actinobacteria_67_15_curated
DinB family protein
13_1_40cm_4_scaffold_7026_19
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(15979..16506)
-----------------
DNA (528bp)
protein (176aa)
DinB family protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1B9_SPHTD
DinB family protein Tax=RBG_16_Actinobacteria_67_15_curated
DinB family protein
13_1_40cm_4_scaffold_7026_20
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(16507..16998)
-----------------
DNA (492bp)
protein (164aa)
DinB family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TW77_9CHLR
DinB family protein Tax=RBG_16_RIF_CHLX_72_14_curated
DinB family protein
13_1_40cm_4_scaffold_7026_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(17003..17728)
-----------------
DNA (726bp)
protein (242aa)
dihydropyrimidinase (EC:3.5.2.2); K01464 dihydropyrimidinase [EC:3.5.2.2] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Dihydropyrimidinase id=2981909 bin=GWF2_Ignavibacteria_35_20 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
dihydropyrimidinase
13_1_40cm_4_scaffold_7026_22
unknown

Not on your lists

18023..18427
-----------------
DNA (405bp)
protein (135aa)

This feature has no annotations

13_1_40cm_4_scaffold_7026_23
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(18482..19900)
-----------------
DNA (1419bp)
protein (473aa)
Uncharacterized protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H9Z2_ACTM4
Putative secreted protein Tax=RBG_16_RIF_CHLX_69_14_curated
hypothetical protein
13_1_40cm_4_scaffold_7026_24
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(19940..20497)
-----------------
DNA (558bp)
protein (186aa)
hypothetical protein n=1 Tax=Streptomyces sp. MspMP-M5 RepID=UPI00038285AD
hypothetical protein
Tax=RBG_16_RIF_CHLX_70_13_curated
13_1_40cm_4_scaffold_7026_25
unknown

Not on your lists

comp(20644..21030)
-----------------
DNA (387bp)
protein (129aa)

This feature has no annotations

13_1_40cm_4_scaffold_7026_26
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21204..21776)
-----------------
DNA (573bp)
protein (191aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8); K00130 betaine-aldehyde dehydrogenase [EC:1.2.1.8] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
aldehyde dehydrogenase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE56A
thcA; betaine aldehyde dehydrogenase
13_1_40cm_4_scaffold_7026_27
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21728..22600)
-----------------
DNA (873bp)
protein (291aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8); K00130 betaine-aldehyde dehydrogenase [EC:1.2.1.8] Tax=RBG_16_Deltaproteobacteria_49_23_curated
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Putative aldehyde dehydrogenase n=1 Tax=Paracoccus methylutens RepID=A7UBP5_9RHOB
13_1_40cm_4_scaffold_7026_28
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(22603..23055)
-----------------
DNA (453bp)
protein (151aa)
beta-alanine synthase (EC:3.5.1.6)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A407_9BACT
aguB; N-carbamoylputrescine amidase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Displaying 28 items

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