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13_1_40cm_4_scaffold_7491

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_7491_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(362..1114)
DNA (753bp) protein (251aa)
biotin--[acetyl-CoA-carboxylase] ligase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] Tax=RBG_16_Gemmatimo
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8L6_GEMAT
biotin/acetyl-CoA-carboxylase ligase
13_1_40cm_4_scaffold_7491_2
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1102..1884)
DNA (783bp) protein (261aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphat
Undecaprenyl-diphosphatase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PYM4_9FIRM
bacitracin resistance protein BacA
13_1_40cm_4_scaffold_7491_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1881..2705)
DNA (825bp) protein (275aa)
UbiA prenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Digeranylgeranylglyceryl phosphate synthase n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BTT7_9EURY
UbiA prenyltransferase
13_1_40cm_4_scaffold_7491_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(2698..3879)
DNA (1182bp) protein (394aa)
putative glycosyltransferase (EC:2.4.-.-) Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8L4_GEMAT
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA
13_1_40cm_4_scaffold_7491_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3828..4748)
DNA (921bp) protein (307aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=GWC2_Gemmatimonadetes_71_10_curated
tRNA dimethylallyltransferase
tRNA dimethylallyltransferase 2 id=4849898 bin=GWC2_Methylomirabilis_70_16 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_7491_6
unknown

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4892..5386
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_40cm_4_scaffold_7491_7
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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5612..6586
DNA (975bp) protein (325aa)
Uncharacterized protein n=3 Tax=Bordetella pertussis RepID=V8VIP2_BORPT
Uncharacterized protein Tax=RBG_13_Chloroflexi_68_17_curated
13_1_40cm_4_scaffold_7491_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(6508..8856)
DNA (2349bp) protein (783aa)
Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QK09_DESAH
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Aerotolerance-related protein BatD
13_1_40cm_4_scaffold_7491_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8853..10493)
DNA (1641bp) protein (547aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8L0_GEMAT
hypothetical membrane protein; K07114 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
von Willebrand factor type A
13_1_40cm_4_scaffold_7491_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10555..11424)
DNA (870bp) protein (290aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K9_GEMAT
hypothetical membrane protein; K07114 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
13_1_40cm_4_scaffold_7491_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11421..12314)
DNA (894bp) protein (298aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_7491_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12311..14179)
DNA (1869bp) protein (623aa)
ATPase, AAA family n=5 Tax=Bordetella RepID=V9AUQ7_BORPT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATPase associated with various cellular activities AAA_3
13_1_40cm_4_scaffold_7491_13
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14176..15747)
DNA (1572bp) protein (524aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TK84_9CHLR
PBS lyase HEAT domain-containing protein Tax=RBG_16_Desulfobacca_58_9_curated
HEAT repeat-containing protein
13_1_40cm_4_scaffold_7491_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15751..17298)
DNA (1548bp) protein (516aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XYB8_9BACT
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
short-chain dehydrogenase/reductase SDR
13_1_40cm_4_scaffold_7491_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17335..18054)
DNA (720bp) protein (240aa)
pseudouridine synthase Rsu; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Pseudouridine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K5_GEMAT
pseudouridine synthase Rsu
13_1_40cm_4_scaffold_7491_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18051..18599)
DNA (549bp) protein (183aa)
Segregation and condensation protein B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K4_GEMAT
scpB; segregation and condensation protein B
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aura
13_1_40cm_4_scaffold_7491_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18574..19314)
DNA (741bp) protein (247aa)
Segregation and condensation protein A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K3_GEMAT
scpA; segregation and condensation protein A; K05896 segregation and condensation protein A Tax=RBG_16_Gemmatimonadetes_66_8_curated
scpA; segregation and condensation protein A
13_1_40cm_4_scaffold_7491_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19311..19961)
DNA (651bp) protein (217aa)
Peptidase M50B family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K2_GEMAT
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:AHG90683.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_7491_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


20117..20374
DNA (258bp) protein (86aa)
30S ribosomal protein S20 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS20_GEMAT
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rpsT; 30S ribosomal protein S20
13_1_40cm_4_scaffold_7491_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20394..21227)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8K0_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_7491_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(21229..21849)
DNA (621bp) protein (207aa)
class II aldolase/adducin family protein; K01628 L-fuculose-phosphate aldolase [EC:4.1.2.17] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Class II aldolase/adducin family protein id=2424882 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
class II aldolase/adducin-like protein
13_1_40cm_4_scaffold_7491_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21846..23123)
DNA (1278bp) protein (426aa)
pyrC; dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Dihydroorotase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8J8_GEMAT
dihydroorotase multifunctional complex type
13_1_40cm_4_scaffold_7491_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23123..24088)
DNA (966bp) protein (322aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Aspartate carbamoyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=PYRB_GEMAT
Aspartate carbamoyltransferase
13_1_40cm_4_scaffold_7491_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(24085..24696)
DNA (612bp) protein (204aa)
Bifunctional protein PyrR n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8J6_GEMAT
Bifunctional protein pyrR
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_7491_25
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(24716..25792)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=2 Tax=Proteobacteria RepID=Q706Q9_PSEPU
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_7491_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25947..27479
DNA (1533bp) protein (511aa)
Bacterial transcriptional activator domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JIE4_9BACT
transcriptional activator domain-containing protein
Transcriptional activator domain-containing protein {ECO:0000313|EMBL:AHG88557.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 26 items

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