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13_1_40cm_4_scaffold_7535

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_7535_1
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..991
DNA (990bp) protein (330aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incert
Signal transduction histidine kinase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q390_9FIRM
integral membrane sensor signal transduction histidine kinase
13_1_40cm_4_scaffold_7535_2
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

978..1643
DNA (666bp) protein (222aa)
LuxR family transcriptional regulator id=24542608 bin=RBG_19FT_COMBO_GAL15_69_19 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
LuxR family transcriptional regulator Tax=CSP1_3_Armatimonadetes
two-component system response regulator
13_1_40cm_4_scaffold_7535_3
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(1645..1944)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2QP80_9PSEU
hypothetical protein Tax=RBG_13_Chloroflexi_66_10_curated
hypothetical protein
13_1_40cm_4_scaffold_7535_4
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

comp(1928..2581)
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RGC0_9ACTO
hypothetical protein Tax=RBG_13_Actinobacteria_55_18_curated
hypothetical protein
13_1_40cm_4_scaffold_7535_5
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(2766..4151)
DNA (1386bp) protein (462aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=525904 species="Bacteria; Therm
Fumarate hydratase class II n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEI7_THET1
fumarate lyase
13_1_40cm_4_scaffold_7535_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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4310..4702
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037FC8CB
molybdenum cofactor sulfurase domain containing protein Tax=RBG_16_RIF_WS3X_71_46_curated
molybdenum cofactor sulfurase domain containing protein
13_1_40cm_4_scaffold_7535_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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4766..5557
DNA (792bp) protein (264aa)
Amidohydrolase 2 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6P9_9CHLR
Amidohydrolase 2 {ECO:0000313|EMBL:EFH80660.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DS
hypothetical protein
13_1_40cm_4_scaffold_7535_8
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(5538..6758)
DNA (1221bp) protein (407aa)
Putative HNH endonuclease n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KV33_9ACTO
Putative HNH endonuclease {ECO:0000313|EMBL:CCH15430.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lu
HNH endonuclease
13_1_40cm_4_scaffold_7535_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6822..7088)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1R7_SPHTD
hypothetical protein
cupin Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_7535_10
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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7108..8379
DNA (1272bp) protein (424aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6Z9_9CHLR
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFH80760.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter
major facilitator transporter
13_1_40cm_4_scaffold_7535_11
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8376..9140)
DNA (765bp) protein (255aa)
LmbE family protein id=4708104 bin=GWC2_Proteo_65_14_Ab886 species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
LmbE family protein Tax=GWC2_Deltaproteobacteria_65_14_curated
mycothiol conjugate amidase Mca
13_1_40cm_4_scaffold_7535_12
Candidatus Omnitrophus sp. SKK-01, Candidatus Omnitrophus, Omnitrophica, Bacteria

Not on your lists

9232..9639
DNA (408bp) protein (136aa)
ADP-ribose pyrophosphatase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q411_9FIRM
NUDIX hydrolase, core domain protein {ECO:0000313|EMBL:KJJ85400.1}; TaxID=1609969 species="Bacteria; Omnitrophica; Candidatus Omnitrophus.;" source="Candidatus Omnitrophus sp. SKK-01.;"
nudix family hydrolase
13_1_40cm_4_scaffold_7535_13
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

9693..10004
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EIV9_9CHLR
hypothetical protein Tax=RBG_16_Chloroflexi_63_12_curated
13_1_40cm_4_scaffold_7535_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(10219..11196)
DNA (978bp) protein (326aa)
DNA ligase {ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|RuleBase:RU000617};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavu
DNA ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D409_9BACT
hypothetical protein
13_1_40cm_4_scaffold_7535_15
unknown

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comp(11206..11427)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_4_scaffold_7535_16
unknown

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11774..12133
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_40cm_4_scaffold_7535_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

12537..13313
DNA (777bp) protein (259aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YZY3_9ACTN
etfB; electron transfer flavoprotein beta subunit Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
etfB; electron transfer flavoprotein beta subunit
13_1_40cm_4_scaffold_7535_18
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

13313..14284
DNA (972bp) protein (324aa)
Electron transfer flavoprotein alpha subunit; K03522 electron transfer flavoprotein alpha subunit Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Electron transfer flavoprotein alpha subunit id=2043727 bin=GWD2_Deltaproteobacteria_55_8 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Electron transfer flavoprotein alpha subunit
13_1_40cm_4_scaffold_7535_19
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14281..14970
DNA (690bp) protein (230aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX02322.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
LmbE family protein id=3327055 bin=GWC2_Chloroflexi_73_18 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase
13_1_40cm_4_scaffold_7535_20
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14925..15083
DNA (159bp) protein (53aa)
Mycothiol S-conjugate amidase {ECO:0000256|HAMAP-Rule:MF_01482}; EC=3.5.1.115 {ECO:0000256|HAMAP-Rule:MF_01482};; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae;
mycothiol conjugate amidase Mca
13_1_40cm_4_scaffold_7535_21
Geoglobus acetivorans, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

15080..15844
DNA (765bp) protein (255aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=565033 specie
NAD-dependent protein deacylase n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RZ09_FERPA
transcriptional regulatory protein, Sir2 family
13_1_40cm_4_scaffold_7535_22
unknown

Not on your lists

comp(15841..16119)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_4_scaffold_7535_23
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(16119..17279)
DNA (1161bp) protein (387aa)
aminotransferase (EC:2.6.1.-) Tax=RBG_16_RIF_WS3X_71_46_curated
Aminotransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020Q6_SOLUE id=5223443 bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
class I and II aminotransferase
13_1_40cm_4_scaffold_7535_24
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17350..18135)
DNA (786bp) protein (262aa)
Cupin 2 barrel domain-containing protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K2V4_SACES
Uncharacterized protein {ECO:0000313|EMBL:CEL13131.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-N
Cupin 2 barrel domain-containing protein
13_1_40cm_4_scaffold_7535_25
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

18188..19168
DNA (981bp) protein (327aa)
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) (EC:1.1.1.91) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Aldo/keto reductase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AXD1_HERA2
aldo/keto reductase
13_1_40cm_4_scaffold_7535_26
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

19168..21090
DNA (1923bp) protein (641aa)
pyridoxal-5'-phosphate-dependent protein subunit beta; K01754 threonine dehydratase [EC:4.3.1.19] Tax=RBG_16_Chloroflexi_63_12_curated
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025L3_SOLUE
pyridoxal-5'-phosphate-dependent protein subunit beta
13_1_40cm_4_scaffold_7535_27
R_NC10_66_22, NC10, Bacteria

Not on your lists

21092..21871
DNA (780bp) protein (260aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4J8_9CHLR
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
3-oxoacyl-ACP reductase
13_1_40cm_4_scaffold_7535_28
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21871..22989
DNA (1119bp) protein (373aa)
fadE10; acyl-CoA dehydrogenase (EC:1.3.99.-)
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:CAM02411.1}; EC=1.3.99.- {ECO:0000313|EMBL:CAM02411.1};; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccha
Acyl-CoA dehydrogenase n=2 Tax=Saccharopolyspora erythraea RepID=T2RWQ9_SACER
13_1_40cm_4_scaffold_7535_29
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

22999..23973
DNA (975bp) protein (325aa)
nucleoside-diphosphate-sugar epimerase; K00329 NADH dehydrogenase [EC:1.6.5.3]; K00356 NADH dehydrogenase [EC:1.6.99.3] Tax=RBG_16_RIF_CHLX_72_14_curated
NADH-ubiquinone oxidoreductase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B3AA0B
nucleoside-diphosphate-sugar epimerase
13_1_40cm_4_scaffold_7535_30
unknown

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23977..24333
DNA (357bp) protein (119aa)

This feature has no annotations

Displaying 30 items

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