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13_1_40cm_4_scaffold_754

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_754_1
unknown

Not on your lists

comp(2..109)
DNA (108bp) protein (36aa)

This feature has no annotations

13_1_40cm_4_scaffold_754_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(145..528)
DNA (384bp) protein (128aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG87628.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_754_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(539..1846)
DNA (1308bp) protein (436aa)
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6A7_GEMAT
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein {ECO:0000313|EMBL:AHG90178.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.
13_1_40cm_4_scaffold_754_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1843..2583)
DNA (741bp) protein (247aa)
DSBA oxidoreductase n=2 Tax=Chloroflexus RepID=A9WGR1_CHLAA
protein-disulfide isomerase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
DSBA oxidoreductase
13_1_40cm_4_scaffold_754_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2803..6165
DNA (3363bp) protein (1121aa)
TonB-dependent outer membrane protein, SusC/RagA
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG90187.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
TonB-dependent receptor plug id=2752110 bin=GWF2_Melioribacter_38_21 species=Muricauda ruestringensis genus=Muricauda taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
13_1_40cm_4_scaffold_754_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6184..7638
DNA (1455bp) protein (485aa)
SusD-like protein
SusD-like protein {ECO:0000313|EMBL:AHG90185.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Putative uncharacterized protein id=2752104 bin=GWF2_Melioribacter_38_21 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
13_1_40cm_4_scaffold_754_7
unknown

Not on your lists

7734..8183
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_40cm_4_scaffold_754_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8190..8993)
DNA (804bp) protein (268aa)
TonB-dependent siderophore receptor n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QSD8_SPILD
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AHG91764.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_754_9
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

comp(9004..9531)
DNA (528bp) protein (176aa)
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Geobacter sulfurreducens RepID=D7AM95_GEOSK
peptidylprolyl cis-trans isomerase lipoprotein, FKBP-type
Tax=BJP_IG2158_Zixibacteria_48_33
13_1_40cm_4_scaffold_754_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9817..12849
DNA (3033bp) protein (1011aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB40_GEMAT
putative outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:BAH39446.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (s
13_1_40cm_4_scaffold_754_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12864..14141
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB41_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39447.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_4_scaffold_754_12
RBG_13_Chloroflexi_46_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(14203..14544)
DNA (342bp) protein (114aa)
Putative Cupredoxin n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSF8_THIA3
blue (type 1) copper domain protein Tax=RBG_13_Chloroflexi_46_9_curated
putative Cupredoxin
13_1_40cm_4_scaffold_754_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14541..15401)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8E4_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_754_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15427..16368)
DNA (942bp) protein (314aa)
Metalloendopeptidase-like protein Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase M23 id=7201700 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
M23 peptidase domain-containing protein
13_1_40cm_4_scaffold_754_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(16459..17973)
DNA (1515bp) protein (505aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionyl-tRNA synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B6_GEMAT
13_1_40cm_4_scaffold_754_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17973..18209)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B7_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_4_scaffold_754_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18798..19754)
DNA (957bp) protein (319aa)
accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ACCA_GEMAT
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
13_1_40cm_4_scaffold_754_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19823..23281)
DNA (3459bp) protein (1153aa)
dnaE; DNA polymerase III alpha subunit (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA polymerase III alpha subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B9_GEMAT
DNA polymerase III, alpha subunit
13_1_40cm_4_scaffold_754_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23318..24646
DNA (1329bp) protein (443aa)
Sodium/hydrogen exchanger family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A508_GEMAT
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:AHG89396.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_754_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

25029..26261
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM3_GEMAT
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_754_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

26258..27211
DNA (954bp) protein (318aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_754_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

27199..28314
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6C0_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_754_23
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(28524..29759)
DNA (1236bp) protein (412aa)
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
glutamate dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] id=14625145 bin=bin7_NC10_sister species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
gdhA; glutamate dehydrogenase
13_1_40cm_4_scaffold_754_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(29803..30954)
DNA (1152bp) protein (384aa)
TPR-repeat protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BVF0_METCG
TPR-repeat-containing protein Tax=GWC2_Gemmatimonadetes_71_10_curated
TPR-repeat-containing protein
13_1_40cm_4_scaffold_754_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

31023..32354
DNA (1332bp) protein (444aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZGV2_TERRK
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
13_1_40cm_4_scaffold_754_26
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(32351..32983)
DNA (633bp) protein (211aa)
molybdopterin-binding oxidoreductase; K07147 id=14632273 bin=bin9_gal15 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
molybdopterin binding oxidoreductase; K07147 Tax=RBG_16_Actinobacteria_67_10_curated
oxidoreductase molybdopterin binding protein
13_1_40cm_4_scaffold_754_27
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(32991..33713)
DNA (723bp) protein (241aa)
lipB; lipoyltransferase (EC:2.3.1.181); K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] Tax=GWC2_Gemmatimonadetes_71_10_curated
Octanoyltransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFX3_9BACT
Octanoyltransferase
13_1_40cm_4_scaffold_754_28
unknown

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comp(33710..34117)
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_40cm_4_scaffold_754_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(34114..35541)
DNA (1428bp) protein (476aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Dihydrolipoyl dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6C7_GEMAT
dihydrolipoamide dehydrogenase
13_1_40cm_4_scaffold_754_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(35562..36830)
DNA (1269bp) protein (423aa)
pdhC; pyruvate dehydrogenase E2 component (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_cur
Pyruvate dehydrogenase E2 component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D0_GEMAT
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
Displaying items 1-30 of 32 in total

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