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13_1_40cm_4_scaffold_78

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_78_1
unknown

Not on your lists

comp(2..622)
DNA (621bp) protein (207aa)

This feature has no annotations

13_1_40cm_4_scaffold_78_2
unknown

Not on your lists

comp(946..1374)
DNA (429bp) protein (143aa)

This feature has no annotations

13_1_40cm_4_scaffold_78_3
unknown

Not on your lists

1540..2112
DNA (573bp) protein (191aa)

This feature has no annotations

13_1_40cm_4_scaffold_78_4
unknown

Not on your lists

2219..2533
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_4_scaffold_78_5
unknown

Not on your lists

2765..4795
DNA (2031bp) protein (677aa)

This feature has no annotations

13_1_40cm_4_scaffold_78_6
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4801..6009
DNA (1209bp) protein (403aa)
Fibronectin type III domain protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QID4_CATAD
fibronectin type III domain-containing protein
Fibronectin type III domain protein {ECO:0000313|EMBL:ACU75011.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Cate
13_1_40cm_4_scaffold_78_7
unknown

Not on your lists

6009..8423
DNA (2415bp) protein (805aa)

This feature has no annotations

13_1_40cm_4_scaffold_78_8
unknown

Not on your lists

comp(8429..8893)
DNA (465bp) protein (155aa)

This feature has no annotations

13_1_40cm_4_scaffold_78_9
unknown

Not on your lists

comp(8970..9647)
DNA (678bp) protein (226aa)

This feature has no annotations

13_1_40cm_4_scaffold_78_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10140..11210
DNA (1071bp) protein (357aa)
PKD domain containing protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P111_HALMD
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:ACV49026.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="
13_1_40cm_4_scaffold_78_11
RBG_19FT_COMBO_OP11_39_10_curated, Microgenomates, Bacteria

Not on your lists

comp(11300..11554)
DNA (255bp) protein (85aa)
hypothetical protein Tax=RBG_19FT_COMBO_OP11_39_10_curated
13_1_40cm_4_scaffold_78_12
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

11737..12402
DNA (666bp) protein (222aa)
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_78_13
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

12412..13113
DNA (702bp) protein (234aa)
ribose 5-phosphate isomerase A; K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6] Tax=RBG_16_Archaea_50_20_curated
ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A n=1 Tax=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) RepID=RPIA_META3
13_1_40cm_4_scaffold_78_14
unknown

Not on your lists

comp(13469..14107)
DNA (639bp) protein (213aa)

This feature has no annotations

13_1_40cm_4_scaffold_78_15
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

14816..15988
DNA (1173bp) protein (391aa)
phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RBG_13_Bathyarchaeota_52_12_curated
Phosphoglycerate kinase n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S4G9_METSF
phosphoglycerate kinase
13_1_40cm_4_scaffold_78_trna_1
unknown

Not on your lists

16046..16128
DNA (83bp)
transferRNA
13_1_40cm_4_scaffold_78_16
unknown

Not on your lists

16253..16717
DNA (465bp) protein (155aa)

This feature has no annotations

13_1_40cm_4_scaffold_78_17
R_OD1_Giovannonibacteria_46_20, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

16870..17487
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003645A07
Ig family protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Giovannonibacteria_46_20_curated
hypothetical protein
13_1_40cm_4_scaffold_78_18
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

17525..18361
DNA (837bp) protein (279aa)
Marine sediment metagenome DNA, contig: S06H3_C02025 Tax=RBG_16_Chloroflexi_68_14_curated
13_1_40cm_4_scaffold_78_19
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18399..19802)
DNA (1404bp) protein (468aa)
Drug resistance transporter, EmrB/QacA subfamily n=5 Tax=Thermoanaerobacter RepID=B0K3D4_THEPX
EmrB/QacA subfamily drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EEU62167.1}; Flags: Precursor;; TaxID=589861 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterace
13_1_40cm_4_scaffold_78_20
unknown

Not on your lists

comp(19953..20636)
DNA (684bp) protein (228aa)

This feature has no annotations

13_1_40cm_4_scaffold_78_21
unknown

Not on your lists

20739..20990
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_4_scaffold_78_22
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

21132..22505
DNA (1374bp) protein (458aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1) Tax=RBG_13_Bathyarchaeota_46_16b_curated
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INY7_NITGG
13_1_40cm_4_scaffold_78_23
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

22563..22748
DNA (186bp) protein (62aa)
Preprotein translocase subunit SecG Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_4_scaffold_78_24
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(22774..23751)
DNA (978bp) protein (326aa)
mRNA 3'-end processing factor n=2 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3Z8_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_4_scaffold_78_25
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(23774..24103)
DNA (330bp) protein (110aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_4_scaffold_78_26
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

24251..24574
DNA (324bp) protein (108aa)
DNA/RNA-binding protein Alba n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B4R5_ACIHW
DNA/RNA-binding protein AlbA; K03622 archaea-specific DNA-binding protein Tax=RBG_16_Bathyarchaeota_57_9_curated
DNA/RNA-binding protein Alba
13_1_40cm_4_scaffold_78_27
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

25090..25959
DNA (870bp) protein (290aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19) Tax=RBG_13_Bathyarchaeota_46_16b_curated
4-aminobutyrate aminotransferase (EC:2.6.1.17 2.6.1.11 2.6.1.13)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00037E812F
13_1_40cm_4_scaffold_78_28
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

26416..27102
DNA (687bp) protein (229aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase Tax=RBG_13_Planctomycetes_50_24_curated
Displaying 29 items

View Taxonomy