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13_1_40cm_4_scaffold_8094

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_8094_1
unknown

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comp(1..336)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_4_scaffold_8094_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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636..758
DNA (123bp) protein (41aa)
DNA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A906_GEMAT
DNA-binding protein; K05788 integration host factor subunit beta Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA-binding protein
13_1_40cm_4_scaffold_8094_3
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

876..2645
DNA (1770bp) protein (590aa)
peptidase M61 n=1 Tax=Pontibacter roseus RepID=UPI00036CB6C9
peptidase M61
Peptidase M61 {ECO:0000313|EMBL:AKD05793.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
13_1_40cm_4_scaffold_8094_4
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

2650..2901
DNA (252bp) protein (84aa)
Molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFU7_9BACT
moaD; molybdopterin converting factor, subunit 1; K03636 molybdopterin synthase sulfur carrier subunit Tax=RBG_16_Acidobacteria_68_9_curated
thiamine S protein
13_1_40cm_4_scaffold_8094_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2898..3335
DNA (438bp) protein (146aa)
molybdopterin biosynthesis MoaE protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
molybdopterin (MPT) converting factor, subunit 2 n=1 Tax=Thermus islandicus RepID=UPI0003B77ECE
molybdopterin biosynthesis MoaE protein
13_1_40cm_4_scaffold_8094_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3476..4342
DNA (867bp) protein (289aa)
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
moaA; molybdenum cofactor biosynthesis protein A 1
Molybdenum cofactor biosynthesis protein A id=2653035 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_8094_7
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

4368..5285
DNA (918bp) protein (306aa)
mdh; malate dehydrogenase (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37] Tax=RBG_16_Acidobacteria_68_9_curated
Malate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A902_GEMAT
Malate dehydrogenase
13_1_40cm_4_scaffold_8094_8
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

5282..6073
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000364220E
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
putative integral membrane protein
13_1_40cm_4_scaffold_8094_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

6073..7881
DNA (1809bp) protein (603aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] id=14430250 bin=bin3_NC10 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=CSP1_5_NC10
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1)
13_1_40cm_4_scaffold_8094_10

Not on your lists

7884..8627
DNA (744bp) protein (248aa)
Succinate dehydrogenase subunit B id=1250010 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Succinate dehydrogenase subunit B {ECO:0000313|EMBL:EQB62873.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
fumarate reductase iron-sulfur subunit
13_1_40cm_4_scaffold_8094_11
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

8606..9850
DNA (1245bp) protein (415aa)
putative oxidoreductase; K03885 NADH dehydrogenase [EC:1.6.99.3] Tax=RBG_13_Chloroflexi_66_10_curated
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain-containing protein id=4451068 bin=GWF2_Lentisphaerae_57_35 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
FAD-dependent pyridine nucleotide-disulfide oxidoreductase family protein
13_1_40cm_4_scaffold_8094_12
unknown

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comp(10196..11521)
DNA (1326bp) protein (442aa)

This feature has no annotations

13_1_40cm_4_scaffold_8094_13
unknown

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comp(11582..11806)
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_40cm_4_scaffold_8094_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11807..13267)
DNA (1461bp) protein (487aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GBT4_CHLAD
GAF sensor hybrid histidine kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
multi-sensor hybrid histidine kinase
13_1_40cm_4_scaffold_8094_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

13345..15846
DNA (2502bp) protein (834aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Glutamyl-and glutaminyl-tRNA synthetase id=4166726 bin=GWA2_Ignavibacteria_55_11 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
13_1_40cm_4_scaffold_8094_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16256..17911
DNA (1656bp) protein (552aa)
Glutamate carboxypeptidase II n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P5_GEMAT
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:AHG88926.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_8094_17
unknown

Not on your lists

17928..18344
DNA (417bp) protein (139aa)

This feature has no annotations

13_1_40cm_4_scaffold_8094_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18341..19774
DNA (1434bp) protein (478aa)
Membrane protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQT5_KORVE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_8094_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19816..20151
DNA (336bp) protein (112aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_8094_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20160..20594)
DNA (435bp) protein (145aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Deoxycytidine triphosphate deaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DCD_GEMAT
Deoxycytidine triphosphate deaminase
13_1_40cm_4_scaffold_8094_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20811..21176
DNA (366bp) protein (122aa)
nuoA-1; NADH dehydrogenase I subunit A; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase subunit A n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LZL7_GEODF
NADH-ubiquinone/plastoquinone oxidoreductase chain 3
13_1_40cm_4_scaffold_8094_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

21181..21786
DNA (606bp) protein (202aa)
nuoB; NADH-quinone oxidoreductase chain B (EC:1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase subunit B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z3_GEMAT
NAD(P)H-quinone oxidoreductase subunit K
13_1_40cm_4_scaffold_8094_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

21783..22382
DNA (600bp) protein (200aa)
nuoC; NADH-quinone oxidoreductase chain C (EC:1.6.99.5); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase subunit C n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z2_GEMAT
NAD(P)H-quinone oxidoreductase subunit J
13_1_40cm_4_scaffold_8094_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22379..23647
DNA (1269bp) protein (423aa)
nuoD; NADH-quinone oxidoreductase chain D (EC:1.6.99.5); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase subunit D n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z1_GEMAT
NAD(P)H-quinone oxidoreductase subunit H
13_1_40cm_4_scaffold_8094_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

23644..24138
DNA (495bp) protein (165aa)
nuoE; NADH-quinone oxidoreductase chain E (EC:1.6.99.5); K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase chain E n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z0_GEMAT
NADH-quinone oxidoreductase, E subunit
13_1_40cm_4_scaffold_8094_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

24138..25418
DNA (1281bp) protein (427aa)
nuoF; NADH-quinone oxidoreductase chain F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
nuoF; NADH-quinone oxidoreductase chain F (EC:1.6.99.5)
NADH-quinone oxidoreductase chain F n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y9_GEMAT
13_1_40cm_4_scaffold_8094_27
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

25432..26058
DNA (627bp) protein (209aa)
nuoG; putative NADH-quinone oxidoreductase chain G (EC:1.6.99.5); K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative NADH-quinone oxidoreductase chain G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y8_GEMAT
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein
Displaying 27 items

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