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13_1_40cm_4_scaffold_8148

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_8148_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3..311)
DNA (309bp) protein (103aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMD9_NITHX
13_1_40cm_4_scaffold_8148_2
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(552..1403)
DNA (852bp) protein (284aa)
Rhodanese domain-containing protein; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] id=14431442 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Rhodanese domain-containing protein; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] Tax=CSP1_5_NC10
Rhodanese domain-containing protein
13_1_40cm_4_scaffold_8148_3
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(1573..2286)
DNA (714bp) protein (238aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V0C2_ROSS1
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RBG_16_Chloroflexi_68_14_curated
HAD family hydrolase
13_1_40cm_4_scaffold_8148_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2310..2756
DNA (447bp) protein (149aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_8148_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2753..3022)
DNA (270bp) protein (90aa)
Putative alkyl hydroperoxide reductase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N239_ANATU
alkyl hydroperoxide reductase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
putative alkyl hydroperoxide reductase
13_1_40cm_4_scaffold_8148_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3086..3262)
DNA (177bp) protein (59aa)
putative alkyl hydroperoxide reductase
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_8148_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3498..4508)
DNA (1011bp) protein (337aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Subtilisin-like serine proteases (Peptidase S8 family) id=4041157 bin=GWC2_TM7_44_17 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
13_1_40cm_4_scaffold_8148_8
unknown

Not on your lists

4982..5119
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_40cm_4_scaffold_8148_trna_1
unknown

Not on your lists

comp(6040..6113)
DNA (74bp)
transferRNA
13_1_40cm_4_scaffold_8148_9
unknown

Not on your lists

comp(6135..7019)
DNA (885bp) protein (295aa)

This feature has no annotations

13_1_40cm_4_scaffold_8148_10
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7082..8338)
DNA (1257bp) protein (419aa)
signal transduction histidine kinase Tax=RBG_13_Deltaproteobacteria_52_11b_curated
Uncharacterized protein id=2284030 bin=GWB2_Nitrospirae_rel_47_37 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
atypical hybrid histidine kinase
13_1_40cm_4_scaffold_8148_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8322..10421)
DNA (2100bp) protein (700aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacte
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ6_KORVE
PAS/PAC sensor signal transduction histidine kinase
13_1_40cm_4_scaffold_8148_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10440..10715)
DNA (276bp) protein (92aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GVPA_KORVE
Gas vesicle structural protein
Gas vesicle structural protein {ECO:0000256|HAMAP-Rule:MF_00576, ECO:0000256|RuleBase:RU000632}; Short=GVP {ECO:0000256|HAMAP-Rule:MF_00576};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" sourc
13_1_40cm_4_scaffold_8148_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10722..11015)
DNA (294bp) protein (98aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ4_KORVE
gas vesicle protein GVPa Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
gas vesicle protein GvpA
13_1_40cm_4_scaffold_8148_14
unknown

Not on your lists

11075..11428
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_40cm_4_scaffold_8148_15
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11323..12096)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI000367D24C
Gas vesicle synthesis protein {ECO:0000313|EMBL:AIJ23802.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica
gas vesicle synthesis protein GvpLGvpF
13_1_40cm_4_scaffold_8148_16
unknown

Not on your lists

comp(12093..12269)
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_4_scaffold_8148_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(12288..13085)
DNA (798bp) protein (266aa)
Gas vesicle protein n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NQ20_9ACTO
gas vesicle synthesis protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
gas vesicle synthesis protein
13_1_40cm_4_scaffold_8148_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(13082..13408)
DNA (327bp) protein (109aa)
Gas vesicle G n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I4U1_DESAP
Gas vesicle G Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
gas vesicle G
13_1_40cm_4_scaffold_8148_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(13415..14224)
DNA (810bp) protein (270aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ8_KORVE
gas vesicle synthesis GvpLGvpF Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Gas vesicle synthesis GvpLGvpF
13_1_40cm_4_scaffold_8148_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(14225..14512)
DNA (288bp) protein (96aa)
Fe-S cluster protector protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EU98_9BACT
Fe-S cluster protector protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Fe-S cluster protector protein
13_1_40cm_4_scaffold_8148_21
R_RIF_OD1_07_47_12, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(14590..14865)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI0003825003
signal peptidase Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_07_47_12_curated
peptidase S26A, superoxide dismutase maturation protease, nickel-type
13_1_40cm_4_scaffold_8148_22
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14903..15340)
DNA (438bp) protein (146aa)
superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase, Ni {ECO:0000313|EMBL:EFC84900.1}; EC=1.15.1.1 {ECO:0000313|EMBL:EFC84900.1};; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia
Superoxide dismutase, Ni n=1 Tax=Frankia sp. EUN1f RepID=D3CWN2_9ACTO
13_1_40cm_4_scaffold_8148_23
unknown

Not on your lists

comp(15377..16831)
DNA (1455bp) protein (485aa)

This feature has no annotations

13_1_40cm_4_scaffold_8148_24
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(16837..17913)
DNA (1077bp) protein (359aa)
glycerol-3-phosphate dehydrogenase (NAD(P)(+)); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
glycerol-3-phosphate dehydrogenase (NAD(P)(+)); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] id=14628905 bin=bin8_Chloro species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
protein GpsA
13_1_40cm_4_scaffold_8148_25
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(17910..18554)
DNA (645bp) protein (215aa)
membrane protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Glycerol-3-phosphate acyltransferase n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DF29_9CHRO
acyl-phosphate glycerol-3-phosphate acyltransferase
13_1_40cm_4_scaffold_8148_26
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(18551..19867)
DNA (1317bp) protein (439aa)
GTPase Der n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EE46_9CHLR
small GTP-binding protein; K03977 GTP-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
small GTP-binding protein
13_1_40cm_4_scaffold_8148_27
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(19878..20711)
DNA (834bp) protein (278aa)
hydroxymethylbutenyl pyrophosphate reductase; K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] id=14628907 bin=bin8_Chloro species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
13_1_40cm_4_scaffold_8148_28
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21133..21801)
DNA (669bp) protein (223aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferases n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTW7_9FIRM
13_1_40cm_4_scaffold_8148_29
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(21798..22490)
DNA (693bp) protein (231aa)
cmk; cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
Cytidylate kinase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KY93_THERP
Displaying items 1-30 of 39 in total

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