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13_1_40cm_4_scaffold_83

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_83_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1..924
DNA (924bp) protein (308aa)
symporter n=1 Tax=Salisaeta longa RepID=UPI0003B46B0A
Putative symporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
SSS sodium solute transporter superfamily protein
13_1_40cm_4_scaffold_83_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1056..2657
DNA (1602bp) protein (534aa)
tre37A; trehalase tre37A (EC:3.2.1.28); K01194 alpha,alpha-trehalase [EC:3.2.1.28] Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI0003644C73
glycoside hydrolase family 37
13_1_40cm_4_scaffold_83_3
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2631..3860)
DNA (1230bp) protein (410aa)
Glycoside hydrolase 15-related protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WMV6_GEOS8
glycoside hydrolase 15-related protein
Glycoside hydrolase 15-related protein {ECO:0000313|EMBL:BAO29845.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfur
13_1_40cm_4_scaffold_83_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4362..5087)
DNA (726bp) protein (242aa)
trehalose-phosphatase (EC:3.1.3.12); K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12] Tax=GWC2_Gemmatimonadetes_71_10_curated
trehalose-phosphatase (EC:3.1.3.12)
Trehalose-phosphatase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CN52_SIDLE
13_1_40cm_4_scaffold_83_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5084..7354)
DNA (2271bp) protein (757aa)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) (EC:2.4.1.15); K00697 trehalose 6-phosphate synthase [EC:2.4.1.15] Tax=GWC2_Gemmatimonadetes_71_10_curated
Alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) id=4675728 bin=GWC2_Deltaproteobacteria_66_88 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
13_1_40cm_4_scaffold_83_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

7526..9157
DNA (1632bp) protein (544aa)
Tetratricopeptide TPR_4 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IQI4_METNO
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_83_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9202..10095
DNA (894bp) protein (298aa)
Putative M23B family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X7_GEMAT
putative M23B family peptidase Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative M23B family peptidase
13_1_40cm_4_scaffold_83_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10120..11112)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MG56_9EURY
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_83_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11144..13006)
DNA (1863bp) protein (621aa)
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative ABC transporter ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE60_GEMAT id=5223291 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter transmembrane region
13_1_40cm_4_scaffold_83_10
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13086..14015
DNA (930bp) protein (310aa)
UPI0003CF9FE8 related cluster n=1 Tax=unknown RepID=UPI0003CF9FE8
transcriptional regulator Tax=RBG_16_Deltaproteobacteria_50_11_curated
transcriptional regulator
13_1_40cm_4_scaffold_83_11
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13997..14767
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q096S9_STIAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAU67685.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Sti
13_1_40cm_4_scaffold_83_12
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(14877..16103)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV59_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE85585.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
13_1_40cm_4_scaffold_83_13
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(16355..16924)
DNA (570bp) protein (190aa)
methionine-R-sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NNH2_ROSCS
13_1_40cm_4_scaffold_83_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16924..17337)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6Z9_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_83_15
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17496..18806
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXL0_OPITP
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
13_1_40cm_4_scaffold_83_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18843..20111
DNA (1269bp) protein (423aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY5_GEMAT
protein of unknown function DUF445
Uncharacterized protein {ECO:0000313|EMBL:AHG91366.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_83_17
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20176..22242)
DNA (2067bp) protein (689aa)
Potassium/proton antiporter RosB n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PQK1_9DELT
Potassium/proton antiporter RosB {ECO:0000313|EMBL:EPX64777.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" s
regulator of k+ conductance
13_1_40cm_4_scaffold_83_18
unknown

Not on your lists

comp(22313..22576)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_4_scaffold_83_19
unknown

Not on your lists

22634..23245
DNA (612bp) protein (204aa)

This feature has no annotations

13_1_40cm_4_scaffold_83_20
RBG_16_OP11_45_19_curated, Microgenomates, Bacteria

Not on your lists

23464..24138
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Micromonospora sp. CNB394 RepID=UPI00035CDD25
hypothetical protein Tax=RBG_16_OP11_45_19_curated
hypothetical protein
13_1_40cm_4_scaffold_83_21
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(24205..26817)
DNA (2613bp) protein (871aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z144_9BACT id=5225473 bin=16ft_combo_ws3_JS1 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Uncharacterized protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
13_1_40cm_4_scaffold_83_22
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(27033..27428)
DNA (396bp) protein (132aa)
DoxX n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK69_KORVE
DoxX protein
DoxX {ECO:0000313|EMBL:ABF42731.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
13_1_40cm_4_scaffold_83_23
CSP1_5_NC10, NC10, Bacteria

Not on your lists

27636..29258
DNA (1623bp) protein (541aa)
diguanylate cyclase id=14428813 bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
diguanylate cyclase Tax=CSP1_5_NC10
diguanylate cyclase
13_1_40cm_4_scaffold_83_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

29351..30466
DNA (1116bp) protein (372aa)
Putative histidine kinase, classic n=1 Tax=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) RepID=C1CV89_DEIDV
PAS/PAC sensor signal transduction histidine kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
histidine kinase
13_1_40cm_4_scaffold_83_25
unknown

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comp(30546..30866)
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_40cm_4_scaffold_83_26
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31727..33529
DNA (1803bp) protein (601aa)
Beta-lactamase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UFX2_MYXSD
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AGC47866.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stip
13_1_40cm_4_scaffold_83_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

33719..35554
DNA (1836bp) protein (612aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Q9_GEMAT
protein kinase
13_1_40cm_4_scaffold_83_28
unknown

Not on your lists

35514..36554
DNA (1041bp) protein (347aa)

This feature has no annotations

13_1_40cm_4_scaffold_83_29
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

36562..37761
DNA (1200bp) protein (400aa)
Major facilitator superfamily MFS_1 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01R09_SOLUE
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABJ87911.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Soliba
13_1_40cm_4_scaffold_83_30
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37769..38686)
DNA (918bp) protein (306aa)
Transcriptional regulator, LysR family n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LM47_RALME
Putative LysR-family transcriptional regulator {ECO:0000313|EMBL:EYF05175.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromy
LysR family transcriptional regulator
Displaying items 1-30 of 37 in total

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