ggKbase home page

13_1_40cm_4_scaffold_85

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_85_1
unknown

Not on your lists

comp(3..68)
DNA (66bp) protein (22aa)

This feature has no annotations

13_1_40cm_4_scaffold_85_2
unknown

Not on your lists

201..920
DNA (720bp) protein (240aa)

This feature has no annotations

13_1_40cm_4_scaffold_85_3
GWC1_OP11_40_19, Levybacteria, Microgenomates, Bacteria

Not on your lists

1006..2955
DNA (1950bp) protein (650aa)
Glycosyl transferase family 51, peptidoglycan glycosyltransferase {ECO:0000313|EMBL:KKR49906.1}; EC=2.4.1.129 {ECO:0000313|EMBL:KKR49906.1};; TaxID=1618466 species="Bacteria; Microgenomates.;" source=
penicillin-binding protein, 1A family id=71922 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
penicillin-binding protein
13_1_40cm_4_scaffold_85_4
unknown

Not on your lists

comp(2952..3359)
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_40cm_4_scaffold_85_5
unknown

Not on your lists

comp(3420..3617)
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_4_scaffold_85_6
Streptomyces sp. e14, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3674..4456)
DNA (783bp) protein (261aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Streptomyces sp. e14 RepID=D6K702_9ACTO
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EFF92007.2}; TaxID=645465 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces s
RNA polymerase sigma factor SigM, ECF subfamily
13_1_40cm_4_scaffold_85_7
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4462..5967
DNA (1506bp) protein (502aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PZ89_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKP94078.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; T
GAF sensor-containing diguanylate cyclase
13_1_40cm_4_scaffold_85_8
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5971..6609)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036DEB7B
LuxR family two component transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:KKA40219.1}; TaxID=1354891 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC
13_1_40cm_4_scaffold_85_9
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6606..8366)
DNA (1761bp) protein (587aa)
Putative histidine protein kinase n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7CG96_STRBB
putative histidine protein kinase
Putative histidine protein kinase {ECO:0000313|EMBL:ADI09000.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggens
13_1_40cm_4_scaffold_85_10
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

8879..9277
DNA (399bp) protein (133aa)
Large conductance mechanosensitive channel protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QLV7_9CYAN
mscL; large conductance mechanosensitive channel protein
Large-conductance mechanosensitive channel {ECO:0000256|SAAS:SAAS00023935}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueens
13_1_40cm_4_scaffold_85_11
unknown

Not on your lists

9560..9787
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_4_scaffold_85_12
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9859..10980
DNA (1122bp) protein (374aa)
Branched-chain-amino-acid aminotransferase {ECO:0000256|RuleBase:RU004517}; EC=2.6.1.42 {ECO:0000256|RuleBase:RU004517};; TaxID=1203592 species="Bacteria; Actinobacteria; Streptomycetales; Streptomyce
Branched-chain-amino-acid aminotransferase n=1 Tax=Streptomyces sp. HPH0547 RepID=S3B5G4_9ACTO
ilvE; branched-chain-amino-acid aminotransferase
13_1_40cm_4_scaffold_85_13
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(10977..11384)
DNA (408bp) protein (136aa)
hypothetical protein id=14629807 bin=bin8_Chloro species=Catelliglobosispora koreensis genus=Catelliglobosispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein Tax=CSP1_4_Chloroflexi
hypothetical protein
13_1_40cm_4_scaffold_85_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(11371..12693)
DNA (1323bp) protein (441aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TRZ9_9CHLR
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:EFH86072.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; K
Peptidase S8 and S53
13_1_40cm_4_scaffold_85_15
Gordonia aichiensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12867..14099
DNA (1233bp) protein (411aa)
Putative ferredoxin reductase n=1 Tax=Gordonia aichiensis NBRC 108223 RepID=L7KNL0_9ACTO
Putative ferredoxin reductase {ECO:0000313|EMBL:GAC50081.1}; TaxID=1220583 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia aichiensis NBRC 108223.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_40cm_4_scaffold_85_16
unknown

Not on your lists

comp(14106..14531)
DNA (426bp) protein (142aa)

This feature has no annotations

13_1_40cm_4_scaffold_85_17
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14562..14954)
DNA (393bp) protein (131aa)
Methyltransferase {ECO:0000313|EMBL:KHM95037.1}; TaxID=56460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria.;
13_1_40cm_4_scaffold_85_18
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(15247..15684)
DNA (438bp) protein (146aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_85_19
unknown

Not on your lists

comp(15677..16504)
DNA (828bp) protein (276aa)

This feature has no annotations

13_1_40cm_4_scaffold_85_20
RBG_19FT_COMBO_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(16588..17850)
DNA (1263bp) protein (421aa)
Mg-protoporphyrin IX monomethyl ester oxidative cyclase; K04034 anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:4.-.-.-] Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI000380C8E6
Mg-protoporphyrin IX monomethyl ester oxidative cyclase
13_1_40cm_4_scaffold_85_21
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(17922..21509)
DNA (3588bp) protein (1196aa)
Glycosyl transferase family 2 n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AS83_9ARCH
N-glycosyltransferase Tax=RBG_16_Chloroflexi_57_11_curated
N-glycosyltransferase
13_1_40cm_4_scaffold_85_22
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(21506..22423)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QG77_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY57863.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
13_1_40cm_4_scaffold_85_23
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

22534..24168
DNA (1635bp) protein (545aa)
Delta-1-pyrroline-5-carboxylate dehydrogenase 1 n=1 Tax=Thermobifida fusca (strain YX) RepID=Q47SU6_THEFY
delta-1-pyrroline-5-carboxylate dehydrogenase 1
1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:KDA53440.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum
13_1_40cm_4_scaffold_85_24
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24203..24961
DNA (759bp) protein (253aa)
enoyl-CoA hydratase/carnithine racemase (EC:4.2.1.17)
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:EAQ96768.2}; EC=4.2.1.17 {ECO:0000313|EMBL:EAQ96768.2};; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Congregibacter litoralis KT71 RepID=A4AAP6_9GAMM
13_1_40cm_4_scaffold_85_25
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

25425..25961
DNA (537bp) protein (179aa)
Daunorubicin resistance ABC transporter ATPase subunit n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C611_SPHTD
daunorubicin resistance ABC transporter ATPase subunit
Daunorubicin resistance ABC transporter ATPase subunit {ECO:0000313|EMBL:ACZ39563.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobact
13_1_40cm_4_scaffold_85_26
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

25958..26833
DNA (876bp) protein (292aa)
ABC-2 type transporter n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C612_SPHTD
ABC transporter; K09686 antibiotic transport system permease protein Tax=GWC2_RIF_CHLX_73_18_curated
ABC transporter
13_1_40cm_4_scaffold_85_27
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26687..27925)
DNA (1239bp) protein (413aa)
Putative membrane protein n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46XY5_CUPPJ
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AAZ61998.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinat
13_1_40cm_4_scaffold_85_28
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27996..28505
DNA (510bp) protein (170aa)
multidrug ABC transporter permease n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B65D4E
Uncharacterized protein {ECO:0000313|EMBL:KGM17160.1}; Flags: Fragment;; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans
GCN5-like N-acetyltransferase
13_1_40cm_4_scaffold_85_29
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28508..29131
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI000377BBC9
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:CCV12359.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesor
threonine transporter RhtB
13_1_40cm_4_scaffold_85_30
unknown

Not on your lists

comp(29133..29912)
DNA (780bp) protein (260aa)

This feature has no annotations

Displaying items 1-30 of 55 in total

View Taxonomy