ggKbase home page

13_1_40cm_4_scaffold_892

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_892_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..471)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00038011BC
protein of unknown function DUF6 transmembrane
Uncharacterized protein {ECO:0000313|EMBL:AHG91799.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_892_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(724..1602)
DNA (879bp) protein (293aa)
ABC-type glycine betaine transport, periplasmic subunit n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8MYX9_9CYAN
glycine betaine ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Substrate-binding region of ABC-type glycine betaine transport system
13_1_40cm_4_scaffold_892_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1599..2237)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI0003465908
Substrate-binding region of ABC-type glycine betaine transporter; K05845 osmoprotectant transport system substrate-binding protein; K05846 osmoprotectant transport system permease protein Tax=RIFCSPLO
binding-protein dependent transport system inner membrane protein
13_1_40cm_4_scaffold_892_4
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2234..2959)
DNA (726bp) protein (242aa)
Fe(3+)-transporting ATPase {ECO:0000313|EMBL:EGK85622.1}; EC=3.6.3.30 {ECO:0000313|EMBL:EGK85622.1};; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus
Fe(3+)-transporting ATPase (EC:3.6.3.30)
ABC transporter ATP-binding protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003450A99
13_1_40cm_4_scaffold_892_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(2956..3894)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AB-629-O05 RepID=UPI00035C24A0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88701.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_4_scaffold_892_6
unknown

Not on your lists

3991..4083
DNA (93bp) protein (31aa)

This feature has no annotations

13_1_40cm_4_scaffold_892_7
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4097..5209
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RPT3_SPITD
General stress protein {ECO:0000313|EMBL:KEI45016.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.
hypothetical protein
13_1_40cm_4_scaffold_892_8
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5223..6017
DNA (795bp) protein (265aa)
UPF0276 protein USDA257_c44040 n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XAN6_RHIFR
hypothetical protein
UPF0276 protein USDA257_c44040 {ECO:0000256|HAMAP-Rule:MF_00697}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhiz
13_1_40cm_4_scaffold_892_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6014..7141
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037E4C5B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40292.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_4_scaffold_892_10
unknown

Not on your lists

7194..7967
DNA (774bp) protein (258aa)

This feature has no annotations

13_1_40cm_4_scaffold_892_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

7967..8329
DNA (363bp) protein (121aa)
ArsC family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3K3_GEMAT
ArsC family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
arsenate reductase like protein
13_1_40cm_4_scaffold_892_12
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8349..8804
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036BD010
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO34368.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain A
13_1_40cm_4_scaffold_892_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8801..9328
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027H9_SOLUE
DinB-like domain protein
DinB-like domain protein {ECO:0000313|EMBL:AHG92013.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_892_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

9325..10368
DNA (1044bp) protein (348aa)
hypothetical protein; K00641 homoserine O-acetyltransferase [EC:2.3.1.31] Tax=GWC2_Gemmatimonadetes_71_10_curated
PREDICTED: acetyl-CoA--deacetylcephalosporin C acetyltransferase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C18AEF
hypothetical protein
13_1_40cm_4_scaffold_892_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10365..10772
DNA (408bp) protein (136aa)
Acyl dehydratase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HS93_9EURY
MaoC domain protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:AHG88199.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_892_16
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10773..11654)
DNA (882bp) protein (294aa)
UbiA prenyltransferase n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5TAW6_9PLAN
UbiA prenyltransferase {ECO:0000313|EMBL:EMI42666.1}; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sp.
1,4-dihydroxy-2-naphthoate octaprenyltransferase
13_1_40cm_4_scaffold_892_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11651..13543)
DNA (1893bp) protein (631aa)
ABC transporter ATP-binding protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F2155D
ABC transporter-like protein; K06147 ATP-binding cassette, subfamily B, bacterial Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ABC transporter
13_1_40cm_4_scaffold_892_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13585..15231
DNA (1647bp) protein (549aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5I6_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_892_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15228..16490
DNA (1263bp) protein (421aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative uncharacterized protein id=3526204 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_892_20
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(16480..17031)
DNA (552bp) protein (184aa)
DSBA oxidoreductase n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI0002FB0CEE
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:ABA25230.1}; TaxID=240292 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 29413 / PCC 7937).;"
13_1_40cm_4_scaffold_892_21
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17028..17531)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000364C80B
Peroxiredoxin {ECO:0000313|EMBL:ELY98771.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
AhpC/TSA family protein
13_1_40cm_4_scaffold_892_22
RLO_PLX_64_10, Bacteria

Not on your lists

comp(17546..18583)
DNA (1038bp) protein (346aa)
serine protease; K01362 [EC:3.4.21.-] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
HtrA2 peptidase (EC:3.4.21.108)
Protease id=1250725 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_1_40cm_4_scaffold_892_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

18666..19379
DNA (714bp) protein (238aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Short-chain dehydrogenase/reductase SDR n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRK3_9BACT
short-chain dehydrogenase
13_1_40cm_4_scaffold_892_24
unknown

Not on your lists

19504..19980
DNA (477bp) protein (159aa)

This feature has no annotations

Displaying 24 items

View Taxonomy