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13_1_40cm_4_scaffold_906

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_906_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

170..640
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HIY2_ANADF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_4_scaffold_906_2
unknown

Not on your lists

869..1249
DNA (381bp) protein (127aa)

This feature has no annotations

13_1_40cm_4_scaffold_906_3
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1225..1731)
DNA (507bp) protein (169aa)
DNA binding domain protein, excisionase family id=4015604 bin=GWC2_Chloroflexi_73_18 species=Intrasporangium calvum genus=Intrasporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
excisionase family DNA binding domain-containing protein Tax=GWC2_RIF_CHLX_73_18_curated
hypothetical protein
13_1_40cm_4_scaffold_906_4
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2025..2816)
DNA (792bp) protein (264aa)
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARP5_RUBXD
pyridoxal-5'-phosphate-dependent enzyme subunit beta
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit {ECO:0000313|EMBL:ABG05933.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae
13_1_40cm_4_scaffold_906_5
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3072..3899
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BUX2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:BAN68012.1}; TaxID=1248727 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
hypothetical protein
13_1_40cm_4_scaffold_906_trna_1
unknown

Not on your lists

3946..4038
DNA (93bp)
transferRNA
13_1_40cm_4_scaffold_906_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4046..5377
DNA (1332bp) protein (444aa)
Major facilitator superfamily MFS_1 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C999_SPHTD
major facilitator superfamily MFS_1 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
major facilitator superfamily MFS_1
13_1_40cm_4_scaffold_906_7
unknown

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comp(5661..5819)
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_4_scaffold_906_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5976..6440
DNA (465bp) protein (155aa)
recA; recombinase A; K03553 recombination protein RecA Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_906_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6437..7432
DNA (996bp) protein (332aa)
hypothetical protein; K14161 protein ImuB Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
UMUC domain-containing protein DNA-repair protein; K14161 protein ImuB id=14630096 bin=bin8_Chloro species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
13_1_40cm_4_scaffold_906_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7429..7677
DNA (249bp) protein (83aa)
hypothetical protein id=1241818 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_906_11
unknown

Not on your lists

7744..9645
DNA (1902bp) protein (634aa)

This feature has no annotations

13_1_40cm_4_scaffold_906_12
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9595..11544)
DNA (1950bp) protein (650aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037192BD
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:EXG79663.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae;
two component LuxR family transcriptional regulator
13_1_40cm_4_scaffold_906_13
unknown

Not on your lists

11619..11816
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_4_scaffold_906_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11980..15357
DNA (3378bp) protein (1126aa)
dnaE; DNA polymerase III subunit alpha; K14162 error-prone DNA polymerase [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
error-prone DNA polymerase (EC:2.7.7.7)
Error-prone DNA polymerase n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FTP9_ISOV2
13_1_40cm_4_scaffold_906_15
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

15418..15972
DNA (555bp) protein (185aa)
RNA polymerase sigma factor n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVF0_RUBXD
RNA polymerase sigma-H factor (Sigma-30); K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
ECF subfamily RNA polymerase sigma-24 factor
13_1_40cm_4_scaffold_906_16
Streptomyces, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

15969..16691
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI00036D3683
putative transmembrane anti-sigma factor
13_1_40cm_4_scaffold_906_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

16861..18135
DNA (1275bp) protein (425aa)
GAF sensor-containing diguanylate cyclase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Diguanylate cyclase with GAF sensor id=1740414 bin=GWD2_Nitrospirae-related_57_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
GAF domain-containing sensor diguanylate cyclase
13_1_40cm_4_scaffold_906_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(18136..18822)
DNA (687bp) protein (229aa)
Response regulator receiver domain protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W440_9ACTO
putative two-component system response regulator Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
winged helix family two component transcriptional regulator
13_1_40cm_4_scaffold_906_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(18858..19952)
DNA (1095bp) protein (365aa)
Sensor protein yycG (EC:2.7.13.3) id=14625803 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
two-component hybrid sensor and regulator
13_1_40cm_4_scaffold_906_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(19949..21136)
DNA (1188bp) protein (396aa)
GAF sensor signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B7C8_HERA2
GAF sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
GAF sensor signal transduction histidine kinase
13_1_40cm_4_scaffold_906_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(21179..21760)
DNA (582bp) protein (194aa)
DNA ligase I, ATP-dependent (dnl1); K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ATP-dependent DNA ligase I (EC:6.5.1.1)
Probable DNA ligase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=DNLI_OPITP
13_1_40cm_4_scaffold_906_22
unknown

Not on your lists

22012..22512
DNA (501bp) protein (167aa)

This feature has no annotations

13_1_40cm_4_scaffold_906_23
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

22771..22920
DNA (150bp) protein (50aa)
transmembrane_regions 2..20 id=1245893 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
transmembrane_regions 2..20 Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
13_1_40cm_4_scaffold_906_24
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

23191..24267
DNA (1077bp) protein (359aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VPY2_9CYAN
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_4_scaffold_906_25
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24432..24956
DNA (525bp) protein (175aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BZ72_9GAMM
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:KIL37771.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp.
3-demethylubiquinone-9 3-methyltransferase
13_1_40cm_4_scaffold_906_26
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

25241..26380
DNA (1140bp) protein (380aa)
alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M904_9BACL
EutG; alcohol dehydrogenase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_906_27
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

26586..27476
DNA (891bp) protein (297aa)
HAD-superfamily hydrolase, subfamily IIA n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AZ87_FRADG
HAD-superfamily hydrolase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
HAD-superfamily hydrolase
13_1_40cm_4_scaffold_906_28
unknown

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comp(27493..27669)
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_4_scaffold_906_29
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(27683..29080)
DNA (1398bp) protein (466aa)
Metal dependent phosphohydrolase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYM3_THEOJ
metal dependent phosphohydrolase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
putative metal-dependent phosphohydrolase
Displaying items 1-30 of 32 in total

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