ggKbase home page

13_1_40cm_4_scaffold_955

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_955_1
unknown

Not on your lists

comp(1..1584)
DNA (1584bp) protein (528aa)

This feature has no annotations

13_1_40cm_4_scaffold_955_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

1746..2021
DNA (276bp) protein (92aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TKG3_9CHLR
NADH:ubiquinone oxidoreductase chain I-like protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
NADH:ubiquinone oxidoreductase chain I-like protein
13_1_40cm_4_scaffold_955_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2092..2472
DNA (381bp) protein (127aa)
ATP synthase subunit beta n=1 Tax=Oceanicola sp. S124 RepID=UPI000255968A
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
putative uncharacterized protein
13_1_40cm_4_scaffold_955_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2427..3089
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CJ01_DESK7
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_4_scaffold_955_5
unknown

Not on your lists

comp(3070..3216)
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_40cm_4_scaffold_955_6
unknown

Not on your lists

3316..3564
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_4_scaffold_955_trna_1
unknown

Not on your lists

3702..3775
DNA (74bp)
transferRNA
13_1_40cm_4_scaffold_955_7
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(3846..5039)
DNA (1194bp) protein (398aa)
Glycosyl transferase family 2 n=2 Tax=Chloroflexus RepID=A9WH27_CHLAA
glycosyl transferase family protein
Glycosyl transferase family 2 {ECO:0000313|EMBL:ABY34122.1}; Flags: Precursor;; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexu
13_1_40cm_4_scaffold_955_8
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(5070..6146)
DNA (1077bp) protein (359aa)
Glycosyl transferase family 2 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G375_CHLAD
glycosyl transferase family 2 protein
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACL25248.1}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloro
13_1_40cm_4_scaffold_955_9
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(6319..7107)
DNA (789bp) protein (263aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CB85_THET1
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACZ42050.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1)
13_1_40cm_4_scaffold_955_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7318..8061)
DNA (744bp) protein (248aa)
XRE family transcriptional regulator n=1 Tax=Rhodococcus sp. R1101 RepID=UPI000319271B
putative two-component system response regulator Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
regX3; two-component response regulator
13_1_40cm_4_scaffold_955_11
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(8182..8970)
DNA (789bp) protein (263aa)
O-methyltransferase family 3 n=1 Tax=Patulibacter medicamentivorans RepID=H0E1W2_9ACTN
O-methyltransferase family 3 {ECO:0000313|EMBL:EHN12312.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibact
O-methyltransferase
13_1_40cm_4_scaffold_955_12
Thermofilum sp. 1910b, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(9113..10081)
DNA (969bp) protein (323aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5ZNI9_9CREN
Uncharacterized protein {ECO:0000313|EMBL:AGT36126.1}; TaxID=1365176 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp. 1910b.;"
13_1_40cm_4_scaffold_955_13
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(10124..11590)
DNA (1467bp) protein (489aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:CCF83087.1}; EC=2.7.8.6 {ECO:0000313|EMBL:CCF83087.1};; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobact
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EEH5_9CHLR
13_1_40cm_4_scaffold_955_14
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12042..13226
DNA (1185bp) protein (395aa)
Chemotaxis protein methyltransferase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V0N5_9RHIZ
Chemotaxis protein methyltransferase {ECO:0000313|EMBL:ENN84692.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizo
13_1_40cm_4_scaffold_955_15
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13492..13917
DNA (426bp) protein (142aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase RmlC n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BNP6_9GAMM
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AJY68206.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobact
13_1_40cm_4_scaffold_955_16
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13914..15284
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BJ84_9GAMM
NAD(P)-dependent oxidoreductase {ECO:0000313|EMBL:AJY68205.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter su
oxidoreductase domain protein
13_1_40cm_4_scaffold_955_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15292..16563
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000318C053
Uncharacterized protein {ECO:0000313|EMBL:KIZ42489.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
13_1_40cm_4_scaffold_955_18
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16849..17898
DNA (1050bp) protein (350aa)
Polysaccharide pyruvyl transferase n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3IYN6_9RHIZ
polysaccharide pyruvyl transferase family protein
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:EMG51836.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum s
13_1_40cm_4_scaffold_955_19
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17972..19306)
DNA (1335bp) protein (445aa)
GDP-mannose 6-dehydrogenase (EC:1.1.1.132)
UDP-glucose 6-dehydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B3369C
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EPR36036.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desu
13_1_40cm_4_scaffold_955_20
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19306..20619)
DNA (1314bp) protein (438aa)
NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RBG_16_Gamma2_60_9_curated
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00037EC0C3
NAD-dependent epimerase/dehydratase
13_1_40cm_4_scaffold_955_21
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

21087..21908
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI000376EBFD
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:KJH73381.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CEN
glucose-1-phosphate cytidylyltransferase
13_1_40cm_4_scaffold_955_22
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21944..22597
DNA (654bp) protein (218aa)
Putative LmbE-like protein n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EIV3_9CYAN
GlcNAc-PI de-N-acetylase {ECO:0000313|EMBL:AJY68203.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurred
putative LmbE-like protein
13_1_40cm_4_scaffold_955_23
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

22540..23817
DNA (1278bp) protein (426aa)
Glycosyl transferase group 1 n=2 Tax=Chloroflexus RepID=A9WH28_CHLAA
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ABY34123.1}; Flags: Precursor;; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus
13_1_40cm_4_scaffold_955_24
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24060..27299
DNA (3240bp) protein (1080aa)
Fibronectin type iii domain protein n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2Z3K0_9PSEU
VCBS repeat-containing protein
Fibronectin {ECO:0000313|EMBL:AJK56269.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
13_1_40cm_4_scaffold_955_25
unknown

Not on your lists

27333..27755
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_40cm_4_scaffold_955_26
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(27696..28436)
DNA (741bp) protein (247aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CB85_THET1
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACZ42050.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1)
13_1_40cm_4_scaffold_955_27
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

28722..30194
DNA (1473bp) protein (491aa)
Putative Succinoglycan biosynthesis transport protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFX5_9CHLR
Putative Succinoglycan biosynthesis transport protein {ECO:0000313|EMBL:CCF83587.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobact
polysaccharide biosynthesis protein
13_1_40cm_4_scaffold_955_28
unknown

Not on your lists

30484..31551
DNA (1068bp) protein (356aa)

This feature has no annotations

13_1_40cm_4_scaffold_955_29
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31548..32174
DNA (627bp) protein (209aa)
ATPase involved in chromosome partitioning n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLU9_9CHLR
hypothetical protein Tax=RBG_16_Desulfobacca_58_9_curated
capsular exopolysaccharide family
Displaying items 1-30 of 34 in total

View Taxonomy