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13_1_40cm_4_scaffold_982

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_982_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

968..1471
DNA (504bp) protein (168aa)
DNA-3-methyladenine glycosylase (EC:3.2.2.21); K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
mgh; 3-methyladenine DNA glycosylase (EC:3.2.2.-)
Putative 3-methyladenine DNA glycosylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A637_GEMAT
13_1_40cm_4_scaffold_982_2
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1468..1815)
DNA (348bp) protein (116aa)
hypothetical protein id=12494007 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
S23 ribosomal protein Tax=RBG_16_Planctomycetes_64_12_curated
hypothetical protein
13_1_40cm_4_scaffold_982_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2015..3169)
DNA (1155bp) protein (385aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_982_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3196..5673)
DNA (2478bp) protein (826aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037A42DB
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
carboxypeptidase
13_1_40cm_4_scaffold_982_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5673..6866)
DNA (1194bp) protein (398aa)
kbl; putative 2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29); K00639 glycine C-acetyltransferase [EC:2.3.1.29] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
kbl; putative 2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
Putative 2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A638_GEMAT
13_1_40cm_4_scaffold_982_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6863..7891)
DNA (1029bp) protein (343aa)
threonine 3-dehydrogenase (EC:1.1.1.103); K00060 threonine 3-dehydrogenase [EC:1.1.1.103] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Threonine 3-dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A639_GEMAT
Alcohol dehydrogenase GroES domain protein
13_1_40cm_4_scaffold_982_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7928..8644)
DNA (717bp) protein (239aa)
putative oxidoreductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
3-oxoacyl-ACP reductase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6AA04
short-chain dehydrogenase/reductase SDR
13_1_40cm_4_scaffold_982_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8641..11574)
DNA (2934bp) protein (978aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Formate dehydrogenase, alpha subunit n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PS75_KRIFD
formate dehydrogenase subunit alpha
13_1_40cm_4_scaffold_982_9
unknown

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comp(11673..11840)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_4_scaffold_982_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(11957..12781)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A642_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_982_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(12817..13074)
DNA (258bp) protein (86aa)
cation diffusion facilitator family transporter Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_982_12
unknown

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13445..13699
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_4_scaffold_982_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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13784..14071
DNA (288bp) protein (96aa)
Putative transcriptional regulator n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KMZ1_9FIRM
ArsR; transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative transcriptional regulator
13_1_40cm_4_scaffold_982_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14064..14705
DNA (642bp) protein (214aa)
Uncharacterized protein n=2 Tax=Geobacillus RepID=E3ICG3_GEOS0
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_982_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14768..15925)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A645_GEMAT
S-adenosylmethionine-dependent methyltransferase
S-adenosylmethionine-dependent methyltransferase {ECO:0000313|EMBL:AHG90154.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_982_16
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(15922..16290)
DNA (369bp) protein (123aa)
putative prephenate dehydratase; K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] Tax=CG_Anaero_02
chorismate mutase
monofunctional chorismate mutase, clade 1 id=24447245 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermus oshimai genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
13_1_40cm_4_scaffold_982_17
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

16316..16909
DNA (594bp) protein (198aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
Thiamine-phosphate synthase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I501_CALAS
thiE; thiamine-phosphate pyrophosphorylase
13_1_40cm_4_scaffold_982_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16941..17933)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A647_GEMAT
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:AHG90157.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_982_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(17930..18343)
DNA (414bp) protein (138aa)
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative Holliday junction resolvase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A648_GEMAT
Holliday junction resolvase
13_1_40cm_4_scaffold_982_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18361..19572)
DNA (1212bp) protein (404aa)
Transcription termination factor Rho n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LEU2_9BACT
rho; transcription termination factor; K03628 transcription termination factor Rho Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcription termination factor Rho
13_1_40cm_4_scaffold_982_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19763..20851
DNA (1089bp) protein (363aa)
putative membrane-associated Zn-dependent protease Tax=RBG_16_Gemmatimonadetes_66_8_curated
Peptidase M50 id=3516463 bin=GWC2_Proteo_65_14_Ab886 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
putative membrane-associated Zn-dependent protease
13_1_40cm_4_scaffold_982_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

20914..21198
DNA (285bp) protein (95aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_982_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

21198..21383
DNA (186bp) protein (62aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_982_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21793..22929
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B53678
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_982_25
unknown

Not on your lists

22926..24047
DNA (1122bp) protein (374aa)

This feature has no annotations

13_1_40cm_4_scaffold_982_26
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(24022..24264)
DNA (243bp) protein (81aa)
Putative membrane protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGS3_CHLTF
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AEP11184.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (st
13_1_40cm_4_scaffold_982_27
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(24261..25193)
DNA (933bp) protein (311aa)
hypothetical protein Tax=RBG_16_Chloroflexi_63_12_curated
Putative uncharacterized protein id=1866195 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
membrane protein
13_1_40cm_4_scaffold_982_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25162..25797)
DNA (636bp) protein (212aa)
Putative membrane protein/domain protein n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IU37_DESMD
protein of unknown function DUF95 transmembrane
Uncharacterized protein {ECO:0000313|EMBL:AHG89993.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_982_29
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

25848..26699
DNA (852bp) protein (284aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_982_30
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

26783..27355
DNA (573bp) protein (191aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
Displaying items 1-30 of 35 in total

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