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13_1_40cm_4_scaffold_992

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_992_1
unknown

Not on your lists

comp(3..191)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_4_scaffold_992_2
unknown

Not on your lists

564..905
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_40cm_4_scaffold_992_3
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

957..1748
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Nocardiopsis gilva RepID=UPI00036C3295
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EWM18004.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
IclR family transcription regulator
13_1_40cm_4_scaffold_992_4
Tetrasphaera jenkinsii, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1745..2461
DNA (717bp) protein (239aa)
Putative corrinoid protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WC15_9MICO
Dimethylamine corrinoid protein {ECO:0000313|EMBL:CCI54991.1}; TaxID=1193518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jenkinsii Ben 74
methyltransferase cognate corrinoid protein
13_1_40cm_4_scaffold_992_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

2467..2841
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Nocardiopsis gilva RepID=UPI000345827B
hypothetical protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
hypothetical protein
13_1_40cm_4_scaffold_992_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

2828..3817
DNA (990bp) protein (330aa)
Methylenetetrahydrofolate reductase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I430_CALAS
putative 5,10-methylenetetrahydrofolate reductase Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
putative 5,10-methylenetetrahydrofolate reductase
13_1_40cm_4_scaffold_992_7
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

3817..4695
DNA (879bp) protein (293aa)
hypothetical protein; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] Tax=GWC2_RIF_CHLX_73_18_curated
Uncharacterized protein id=4954672 bin=GWC2_Chloroflexi_73_18 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_40cm_4_scaffold_992_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

4692..6518
DNA (1827bp) protein (609aa)
metal-binding protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Uncharacterized protein id=4954671 bin=GWC2_Chloroflexi_73_18 species=Kineosphaera limosa genus=Kineosphaera taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
metal-binding protein
13_1_40cm_4_scaffold_992_9
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

6522..7082
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I432_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM00020.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
13_1_40cm_4_scaffold_992_10
RLO_PLX_64_10, Bacteria

Not on your lists

7082..7375
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00038114E1
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
cobalamin B12-binding domain-containing protein
13_1_40cm_4_scaffold_992_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7372..9048
DNA (1677bp) protein (559aa)
Formate--tetrahydrofolate ligase; K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase id=2486198 bin=GWC2_Chloroflexi_73_18 species=Saccharopolyspora erythraea genus=Saccharopolyspora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_4_scaffold_992_12
unknown

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9088..10209
DNA (1122bp) protein (374aa)

This feature has no annotations

13_1_40cm_4_scaffold_992_13
Streptomyces sp. NRRL S-444, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10659..11249)
DNA (591bp) protein (197aa)
sarcosine oxidase subunit gamma n=1 Tax=Streptomyces prunicolor RepID=UPI000367AE90
Sarcosine oxidase subunit gamma {ECO:0000313|EMBL:KJY31497.1}; TaxID=1609134 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444
soxG; sarcosine oxidase subunit gamma
13_1_40cm_4_scaffold_992_14
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11239..13887)
DNA (2649bp) protein (883aa)
ferredoxin n=1 Tax=Streptomyces chartreusis RepID=UPI000262F078
Ferredoxin {ECO:0000313|EMBL:KDN76051.1}; TaxID=358823 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
ferredoxin
13_1_40cm_4_scaffold_992_15
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13884..14144)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Nocardiopsis baichengensis RepID=UPI000348AB24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH96530.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
13_1_40cm_4_scaffold_992_16
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14146..15360)
DNA (1215bp) protein (405aa)
soxB; Sarcosine oxidase subunit beta (EC:1.5.3.1)
Putative sarcosine oxidase beta subunit n=1 Tax=Streptomyces viridochromogenes Tue57 RepID=L8P057_STRVR
Sarcosine oxidase, subunit beta {ECO:0000313|EMBL:EWM18003.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
13_1_40cm_4_scaffold_992_17
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

15388..16155
DNA (768bp) protein (256aa)
Methyltransferase type 11 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TG71_9CHLR
Methyltransferase type 11 {ECO:0000313|EMBL:EFH88773.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter rac
methyltransferase type 12
13_1_40cm_4_scaffold_992_18
unknown

Not on your lists

comp(16182..16763)
DNA (582bp) protein (194aa)

This feature has no annotations

13_1_40cm_4_scaffold_992_19
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

16984..17166
DNA (183bp) protein (61aa)
30S ribosomal protein S21 n=5 Tax=Clostridium RepID=RS21_CLOK1
30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 Tax=RBG_16_RIF_CHLX_69_14_curated
rpsU; 30S ribosomal protein S21
13_1_40cm_4_scaffold_992_20
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17207..18859
DNA (1653bp) protein (551aa)
Predicted membrane-associated HD superfamily hydrolase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D3W1_PELTS
HD superfamily hydrolase
Predicted membrane-associated HD superfamily hydrolase {ECO:0000313|EMBL:BAF59072.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pe
13_1_40cm_4_scaffold_992_21
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19035..19382
DNA (348bp) protein (116aa)
HDIG domain protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTE2_9DELT
Phosphodiesterase {ECO:0000313|EMBL:KFA88156.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobac
metal dependent phosphohydrolase
13_1_40cm_4_scaffold_992_22
unknown

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19443..19781
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_4_scaffold_992_23
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19900..20268
DNA (369bp) protein (123aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=643648 species="Bacteria; Fi
Endoribonuclease YbeY n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CNW2_SYNLT
hypothetical protein
13_1_40cm_4_scaffold_992_24
unknown

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comp(20193..20588)
DNA (396bp) protein (132aa)

This feature has no annotations

13_1_40cm_4_scaffold_992_25
unknown

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20635..20985
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_40cm_4_scaffold_992_26
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

21361..22569
DNA (1209bp) protein (403aa)
hypothetical protein id=14629098 bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein Tax=CSP1_4_Chloroflexi
hypothetical protein
13_1_40cm_4_scaffold_992_27
Chloroflexus sp. Y-400-fl, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(22556..23152)
DNA (597bp) protein (199aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000255|HAMAP-Rule:MF_00083}; Short=PTH {ECO:0000255|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000255|HAMAP-Rule:MF_00083};; TaxID=480224 species="Bacteria; Chloroflexi; Ch
Peptidyl-tRNA hydrolase n=2 Tax=Chloroflexus RepID=PTH_CHLAA
13_1_40cm_4_scaffold_992_28
unknown

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23214..24404
DNA (1191bp) protein (397aa)

This feature has no annotations

13_1_40cm_4_scaffold_992_29
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

24414..25370
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B4E4D5
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
13_1_40cm_4_scaffold_992_30
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

25401..26264
DNA (864bp) protein (288aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] Tax=RBG_16_Chloroflexi_64_32_curated
dacF2; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI0003801FF3
Displaying items 1-30 of 48 in total

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