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13_1_40cm_4_scaffold_1884_4

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 2749..3345

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 177.0
  • Bit_score: 134
  • Evalue 8.60e-29
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 180.0
  • Bit_score: 214
  • Evalue 1.60e-52
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 185.0
  • Bit_score: 138
  • Evalue 2.90e-30

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 597
ATGGCTGATCTCCCCCTCCCCCCCCAACCGGCGCGGCAGGTCGCGCGTATAGCTGAGCAGGACGAGGCCGATCTCGTCGCCCGCGCCGTCGCCGGCGAGCGGGCGGCGTTCGGGACCCTGGTCGAGCGATACGCCGGCGTGGCGCGCCGCGTGGCGCGTGCGGTGCTGGGCAATCCCGAGGACGCGGACGACGCCGCGCAGGATGCCATGCTCTCGGCGCTCGTCAAGCTCGAGCAGTACGACGCGCGGCGGCCGTTCGGCCCCTGGCTGTTACGGATCGTCGCCAACGCCGCCACGGACCGGCGGCGGCGCCGCTCGGTCCGGCGCGTCGAGCCACTTGACGTCGGGCTCACCGCCGGCGGCGCGCGGCCCGACACGACGACCGAGCGCCGGGCGTTGAACGAGCGGTTGCGACAGGCGCTCGCCGAGCTGCCCGAGCGGCGGCGCATGGCGGTGGTGCTGTTCGACGTCGAAGGCTATTCGCACGGCGAGATCGCCCTAATCCTCGGGATTCCCGAGGGCACGGTTCGATCAGAAGTGTTCCACGCGCGGCGCCGCTTGCGGGTGCTCCTCGCGGACTGGAAGGAGGAGGGATGA
PROTEIN sequence
Length: 199
MADLPLPPQPARQVARIAEQDEADLVARAVAGERAAFGTLVERYAGVARRVARAVLGNPEDADDAAQDAMLSALVKLEQYDARRPFGPWLLRIVANAATDRRRRRSVRRVEPLDVGLTAGGARPDTTTERRALNERLRQALAELPERRRMAVVLFDVEGYSHGEIALILGIPEGTVRSEVFHARRRLRVLLADWKEEG*