ggKbase home page

13_1_40cm_4_scaffold_2_9

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(8711..8950)

Top 3 Functional Annotations

Value Algorithm Source
Deoxyribonuclease/rho motif-related TRAM n=1 Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MX71_PYRCJ similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 79.0
  • Bit_score: 86
  • Evalue 1.10e-14
TRAM domain-containing protein Tax=RBG_16_Archaea_50_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 60.0
  • Bit_score: 103
  • Evalue 1.50e-19
putative RNA-binding protein, contains TRAM domain similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 79.0
  • Bit_score: 96
  • Evalue 5.00e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Archaea_50_20_curated → Archaea

Sequences

DNA sequence
Length: 240
ATGGGTTATGAGAGGAGAGGCTATGGCGGTGGTGCCGGTGCGAACAGATTCGGACCGAAACCGGTCGAAGAAGGCAAAGAATACGATGTCGACATCAAAGAGATCAGTCGCCGCGGTGAGGGAATCGCGCGCGTCGAAGGTCTTGTTGTCTTCGTACCAAACACCAAACCCGGAGATCACATCAAGATAAAGATCACACGGGTTTCGAACCGCTTCGCCTCAGGCGAAGTCATCCAATAG
PROTEIN sequence
Length: 80
MGYERRGYGGGAGANRFGPKPVEEGKEYDVDIKEISRRGEGIARVEGLVVFVPNTKPGDHIKIKITRVSNRFASGEVIQ*