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13_1_40cm_4_scaffold_2

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2_1
unknown

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comp(1..438)
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_4_scaffold_2_2
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(511..2031)
DNA (1521bp) protein (507aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RBG_13_Bathyarchaeota_46_16b_curated
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZN53_THELI
13_1_40cm_4_scaffold_2_3
RBG_16_Archaea_50_20_curated, Archaea

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comp(2071..3099)
DNA (1029bp) protein (343aa)
diphosphomevalonate decarboxylase; K01597 diphosphomevalonate decarboxylase [EC:4.1.1.33] Tax=RBG_16_Archaea_50_20_curated
diphosphomevalonate decarboxylase (EC:4.1.1.33)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003814E9E
13_1_40cm_4_scaffold_2_4
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(3044..4108)
DNA (1065bp) protein (355aa)
GldA; glycerol dehydrogenase; K00096 glycerol-1-phosphate dehydrogenase [NAD(P)] [EC:1.1.1.261] Tax=RBG_16_Bathyarchaeota_48_13_curated
Glycerol-1-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=G1PDH_METKA
GldA; glycerol dehydrogenase
13_1_40cm_4_scaffold_2_5
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(4114..5943)
DNA (1830bp) protein (610aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. MB1 RepID=U6EAY7_9EURY
hypothetical protein; K08979 putative membrane protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_4_scaffold_2_6
RBG_16_Archaea_50_20_curated, Archaea

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comp(5954..6694)
DNA (741bp) protein (247aa)
geranylgeranylglyceryl phosphate synthase-like protein; K07094 putative glycerol-1-phosphate prenyltransferase [EC:2.5.1.-] Tax=RBG_16_Archaea_50_20_curated
hypothetical protein n=1 Tax=Aigarchaeota archaeon JGI 0000001-H6 RepID=UPI000370362D
geranylgeranylglyceryl phosphate synthase-like protein
13_1_40cm_4_scaffold_2_7
Thermofilum sp. 1807-2, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(6708..7871)
DNA (1164bp) protein (388aa)
Geranylgeranyl reductase n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RY40_THEPD
Uncharacterized protein {ECO:0000313|EMBL:AKG39406.1}; TaxID=1550241 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp. 1807-2.;"
geranylgeranyl reductase
13_1_40cm_4_scaffold_2_8
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7898..8602)
DNA (705bp) protein (235aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14318.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_4_scaffold_2_9
RBG_16_Archaea_50_20_curated, Archaea

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comp(8711..8950)
DNA (240bp) protein (80aa)
Deoxyribonuclease/rho motif-related TRAM n=1 Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MX71_PYRCJ
TRAM domain-containing protein Tax=RBG_16_Archaea_50_20_curated
putative RNA-binding protein, contains TRAM domain
13_1_40cm_4_scaffold_2_10
RBG_16_Archaea_50_20_curated, Archaea

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9173..9946
DNA (774bp) protein (258aa)
F420-0:gamma-glutamyl ligase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] Tax=RBG_16_Archaea_50_20_curated
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036E5F94
F420-dependent oxidoreductase
13_1_40cm_4_scaffold_2_11
Pyrolobus fumarii, Pyrolobus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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9943..10674
DNA (732bp) protein (244aa)
DNA polymerase beta domain protein region n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ED67_PYRF1
DNA polymerase beta domain containing protein
DNA polymerase beta domain protein region {ECO:0000313|EMBL:AEM39745.1}; TaxID=694429 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Pyrodictiaceae; Pyrolobus.;" source="Pyrolobus f
13_1_40cm_4_scaffold_2_12
RBG_16_Archaea_50_20_curated, Archaea

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10808..11893
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5ZEJ5_9CREN
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_4_scaffold_2_13
RBG_16_Archaea_50_20_curated, Archaea

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11899..12846
DNA (948bp) protein (316aa)
ATP pyrophosphatase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZK02_THELI
n-type ATP pyrophosphatase superfamily protein Tax=RBG_16_Archaea_50_20_curated
ATP pyrophosphatase
13_1_40cm_4_scaffold_2_14
RBG_16_Archaea_50_20_curated, Archaea

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comp(12843..13427)
DNA (585bp) protein (195aa)
mutT/nudix family protein Tax=RBG_16_Archaea_50_20_curated
NUDIX hydrolase id=3462006 bin=GWA2_Elusimicrobia_69_24 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
NUDIX hydrolase, coenzyme A pyrophosphatase family
13_1_40cm_4_scaffold_2_15
unknown

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comp(13500..13847)
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_4_scaffold_2_16
unknown

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comp(14061..14195)
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_4_scaffold_2_17
unknown

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comp(14398..14658)
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_4_scaffold_2_18
Aeromonas media, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14770..15300
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Aeromonas media WS RepID=K2I8D5_AERME
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX61989.1}; TaxID=1208104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas media WS.;"
13_1_40cm_4_scaffold_2_19
unknown

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comp(15364..15576)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_4_scaffold_2_20
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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15863..16483
DNA (621bp) protein (207aa)
psmB2; proteasome subunit beta (EC:3.4.25.1) Tax=RBG_16_Bathyarchaeota_48_13_curated
proteasome beta subunit (EC:3.4.25.1)
Proteasome subunit beta n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8N0_9ARCH
13_1_40cm_4_scaffold_2_21
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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16537..17166
DNA (630bp) protein (210aa)
Translin n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RY03_THEPD
Translin family protein; K07477 translin Tax=RBG_13_Bathyarchaeota_38_9_curated
translin family protein
13_1_40cm_4_scaffold_2_22
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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17199..17870
DNA (672bp) protein (224aa)
rfk; riboflavin kinase (EC:2.7.1.161) Tax=RBG_13_Bathyarchaeota_38_9_curated
ribK; riboflavin kinase (EC:2.7.1.161)
hypothetical protein n=1 Tax=Aigarchaeota archaeon JGI 0000001-H6 RepID=UPI000376E1D2
13_1_40cm_4_scaffold_2_23
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(17867..18301)
DNA (435bp) protein (145aa)
taqD; glycerol-3-phosphate cytidylyltransferase (EC:2.7.7.39); K14656 FAD synthetase Tax=RBG_16_Bathyarchaeota_48_13_curated
glycerol-3-phosphate cytidylyltransferase (EC:2.7.7.39)
Glycerol-3-phosphate cytidylyltransferase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8M8_9ARCH
13_1_40cm_4_scaffold_2_24
unknown

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comp(18376..18942)
DNA (567bp) protein (189aa)

This feature has no annotations

13_1_40cm_4_scaffold_2_25
Pyrobaculum neutrophilum, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(19011..19268)
DNA (258bp) protein (86aa)
Cytidyltransferase-related domain protein n=1 Tax=Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta) RepID=B1YC40_PYRNV
cytidyltransferase-like protein
Cytidyltransferase-related domain protein {ECO:0000313|EMBL:ACB40894.1}; TaxID=444157 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum.;" source="Pyrobacul
13_1_40cm_4_scaffold_2_26
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(19265..20041)
DNA (777bp) protein (259aa)
diphthine synthase (EC:2.1.1.98); K00586 diphthine synthase [EC:2.1.1.98] Tax=RBG_13_Bathyarchaeota_38_9_curated
diphthine synthase (EC:2.1.1.98)
Diphthine synthase n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=DPHB_THEKO
13_1_40cm_4_scaffold_2_27
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(20090..22132)
DNA (2043bp) protein (681aa)
RecA superfamily ATPase implicated in signal transduction n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A5C5_THESM
hypothetical protein containing KaiC-domain Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein containing KaiC-domain
13_1_40cm_4_scaffold_2_28
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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22660..23280
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI0003643B83
Strain A contig00006, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ55671.1}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiotherm
hypothetical protein
13_1_40cm_4_scaffold_2_29
RBG_16_Archaea_50_20_curated, Archaea

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23609..24118
DNA (510bp) protein (170aa)
Putative HEAT repeat-containing PBS lyase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKC1_NITGG
HEAT repeat-containing PBS lyase Tax=RBG_16_Archaea_50_20_curated
HEAT repeat-containing PBS lyase
13_1_40cm_4_scaffold_2_30
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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24135..25235
DNA (1101bp) protein (367aa)
hypothetical protein; K15429 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Met-10+ like protein n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AF65_PYRYC
hypothetical protein
Displaying items 1-30 of 82 in total

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