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13_1_40cm_4_scaffold_3272_22

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(12262..12807)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K6_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 177.0
  • Bit_score: 142
  • Evalue 3.80e-31
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 177.0
  • Bit_score: 153
  • Evalue 6.00e-35
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.8
  • Coverage: 177.0
  • Bit_score: 153
  • Evalue 3.00e-34

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 546
ATGGTGAATGACGACGCTGACGTAGTCGCCCGGGTGCTCGCTGGCGATGGGGAGGCGTTCGGGATTCTCATCCGGCGCTATGAGCCGGGCCTGCTTCGCTTCGCGACGCGTATGCTCGGGAATCCCGATGCGGCGGCGGATGCGGTGGCTGAGAGTCTCGTGCGCGCCTATCGGCATTTGGCGCAATGTCGAGACCCGTCGCGGCTGCGGAGCTGGTTGTACCGGATCACCGGCAATCGCTGTCGGAGTCATTTGGCGCGGCGGCACACGAACGACATACCGCTGAGCGAGGCCCCCGCGCCGGCGTTGGCGGAAGCGTCTGATACTTGGGAAGTGCTGGAGCGGAGCGAGCAGGTCGCACTGGTGGAACGCGCGCTCGCGGCGTTGCCGGCCGAGAAACGTGAAGCGTTCGTTTTGAAGCACGTGGAAGGGATGAGTTACGAGGAGATGGCGGCAGTGACGGGAGCGCGAATTCCCACGCTCAAGATGCGTGTGCATCGGGCCCGGGAAGCATTGCTGGAAGCGCTCGAGGAGGTTGTACGATGA
PROTEIN sequence
Length: 182
MVNDDADVVARVLAGDGEAFGILIRRYEPGLLRFATRMLGNPDAAADAVAESLVRAYRHLAQCRDPSRLRSWLYRITGNRCRSHLARRHTNDIPLSEAPAPALAEASDTWEVLERSEQVALVERALAALPAEKREAFVLKHVEGMSYEEMAAVTGARIPTLKMRVHRAREALLEALEEVVR*