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13_1_40cm_4_scaffold_3272

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3272_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..324)
DNA (324bp) protein (108aa)
Heme exporter protein CcmB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA42_GEMAT
ccmB; heme exporter protein CcmB; K02194 heme exporter protein B Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ccmB; heme exporter protein CcmB
13_1_40cm_4_scaffold_3272_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(311..967)
DNA (657bp) protein (219aa)
ccmA; putative heme exporter protein CcmA (EC:3.6.3.41)
Putative heme exporter protein CcmA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA43_GEMAT
heme ABC exporter, ATP-binding protein CcmA; K09687 antibiotic transport system ATP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_3272_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(954..1319)
DNA (366bp) protein (122aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C749_DESTA
two-component response regulator protein; K15012 two-component system, response regulator RegA Tax=RBG_16_Gemmatimonadetes_66_8_curated
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
13_1_40cm_4_scaffold_3272_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(1335..1676)
DNA (342bp) protein (114aa)
Anti-sigma factor antagonist n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FI22_DESAA
anti-sigma-factor antagonist
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_3272_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

1844..3790
DNA (1947bp) protein (649aa)
acs; acetyl-coenzyme A synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Acetyl-coenzyme A synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ACSA_GEMAT
Acetyl-coenzyme A synthetase
13_1_40cm_4_scaffold_3272_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3726..4196)
DNA (471bp) protein (157aa)
Vitamin K epoxide reductase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2P1_CONWI
VKOR family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
vitamin K epoxide reductase
13_1_40cm_4_scaffold_3272_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4196..4897)
DNA (702bp) protein (234aa)
putative oxidoreductase Tax=RBG_16_Gemmatimonadetes_66_8_curated
DSBA oxidoreductase id=5097429 bin=PER_GWF2_39_17 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
DSBA oxidoreductase
13_1_40cm_4_scaffold_3272_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4894..5214)
DNA (321bp) protein (107aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_3272_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

5329..5598
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA48_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_4_scaffold_3272_10
unknown

Not on your lists

5924..6136
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_4_scaffold_3272_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6123..6506)
DNA (384bp) protein (128aa)
hypothetical protein; K07397 putative redox protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
OsmC/Ohr family protein id=2170887 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
yhfA; hypothetical protein
13_1_40cm_4_scaffold_3272_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6532..7062)
DNA (531bp) protein (177aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_3272_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7082..7606)
DNA (525bp) protein (175aa)
pgsA2; CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=GWC2_Gemmatimonadetes_71_10_curated
CDP-alcohol phosphatidyltransferase family protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MUZ5_CORCM
pgsA2; CDP-alcohol phosphatidyltransferase
13_1_40cm_4_scaffold_3272_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7622..8080
DNA (459bp) protein (153aa)
Cyclic nucleotide-binding domain-containing protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MHI7_CORCM
cyclic nucleotide-binding domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
cyclic nucleotide-binding domain-containing protein
13_1_40cm_4_scaffold_3272_15
unknown

Not on your lists

8091..8450
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_40cm_4_scaffold_3272_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8447..8773)
DNA (327bp) protein (109aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetratricopeptide TPR_1 repeat-containing protein
13_1_40cm_4_scaffold_3272_17
unknown

Not on your lists

9012..9542
DNA (531bp) protein (177aa)

This feature has no annotations

13_1_40cm_4_scaffold_3272_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9893..10777
DNA (885bp) protein (295aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_
rca:Rcas_3355 arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] id=1246557 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1)
13_1_40cm_4_scaffold_3272_19
unknown

Not on your lists

comp(10778..10984)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_4_scaffold_3272_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11018..11674)
DNA (657bp) protein (219aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92076.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_3272_21
GWF1_Spirochaetes_49_6_curated, Spirochaetes, Bacteria

Not on your lists

comp(11735..12265)
DNA (531bp) protein (177aa)
alpha amylase catalytic subunit Tax=GWF1_Spirochaetes_49_6_curated
13_1_40cm_4_scaffold_3272_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12262..12807)
DNA (546bp) protein (182aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K6_GEMAT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_3272_23
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12836..13174)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NZ11_GRAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEU35663.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC B
Displaying 23 items

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