ggKbase home page

13_1_40cm_4_scaffold_6077_21

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(19175..20752)

Top 3 Functional Annotations

Value Algorithm Source
cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor (EC:3.1.4.16) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 495.0
  • Bit_score: 446
  • Evalue 3.80e-122
2',3'-cyclic-nucleotide 2'-phosphodiesterase; K01119 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] id=24473036 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 37.9
  • Coverage: 496.0
  • Bit_score: 305
  • Evalue 7.40e-80
5'-Nucleotidase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 423.0
  • Bit_score: 336
  • Evalue 1.40e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1578
ATGCACGTGCTCTGGGCGCTGCTCGTCGCGGCGCAGACCTCCGTTTCTCGAGCCCCCCTCCCGTCCCCCGCTCCCGATACCGCGCACTTCGTCAGCCGACAGGACAGCACGGTGCTCCGGGTGCTGGCGCTCAACGACTTCCACGGCGCGCTCGAGGCGCGCTCGTGGCCTTGGTCTCACGGGAGGGCGGTGGGCGGCGCCGCGGCGCTCAAACCGTGGCTCGACTCGTTGGCGCGGGCGTGCGGCTGCACCACGATCCGCCTCGACGCCGGCGACGAGATGCAGGGGACCCTGCTCTCGAACTTCGGCTTCGGGCTGCCGGCGATCACGGCCATGAACGCGTTCGGCATCGACGCCGCGGCGATCGGAAACCACGAGTTCGACTGGTCGGTGGACACGTTGCGCGCGCGGATGGCGGGGGCGAGGTACCGCTTCCTCGCCGCCAATATCAGCGACACGACCGGAACGGCGCGGCCCGGCTGGGCGGAGCCGTGGACGCTGATCTCGCGCGGCGGCCTGAAGATCGCGGTGATCGGGCTCGCGCTCAAAGCGACGCCGACGAACACGACACCGCGCAACGTGCAGGGGCTCGCGTTCGGCGACGGGGCGGCGGCGGTGCGGCGCGTGCTGCCACAGGCGCGGGCCGCGGCCGACTTCGTGATCGTGGTGGCGCATGAAGGAGCGTTCTGCGACGGCCCGCCCGCGACGGACCCGGTTCCGGCCCCGGCGTGTCACGGCGACATCCTGGACATCGCGCGCGGCCTCGACTCGGCGTCGGTGGACTTGATCGTGAGCGGGCACACGCACTCGCTCGTGAACACCGTGGTGAACGGGATCCCGATCGTCCAGGCGCGCTCGAGCGGCGCCGGGATCGCGGTCGTGGACTTCGTGCGGCTGCGGGGAACGAAACGCCAGGTCCGCGCCCGCATCGAGACGCCCTATACCGATCAGGTCCGTCCCGATGCCGCGCTCGGCGACACGCTACGCGTCTACCAACGAGCCATCGAGACCGTCCGGAGCCGTCCGGTGGCACGCGTCAAGGTGGAGCTGCGCCGCACCGGCCAGGAGTACGGCCTCGGCCGCCTGATCGCCGACGCGCAGCGCAACGTCGCGCAGGCGGACGTGGCGATCGTGAACAACGGCGGTATCCGGGCCGATCTGGCCGCCGGCGCCGTGACCTATGGCGATCTGTACGAGGTGCAGCCGTTCCAGAACCGGCTCGTGCGGCTGCTCGCCACGGGGAAAGTGCTGAAGGAAGCGCTGGAGCACGTCGTCGCGGGCGACCGGGCCGATGCGCACGTCTCCGGGCTGGAAGTCTGGTATGATCCGGGCAAGCGCGCCGGTCGGCGGGTCACCAAGCTCACGCTCGCCGACGGGCGCGGGGTGGACGACGGGCGGACGTACACGGTTGCCGTGAGTGATTTCCTCGCCGCCGGTGGGAGCGGGTTCACGATGTTGCGCGGCCTCCCCGCCGACGACGCGGGGCTGGTCGACCTGGACGCGCTGATCCGGTATCTCTCAGAACTGCGGTCGCCGGTCGAGCCGCCGGCCGACGAGCGCATCCACCGGGCCCGATGA
PROTEIN sequence
Length: 526
MHVLWALLVAAQTSVSRAPLPSPAPDTAHFVSRQDSTVLRVLALNDFHGALEARSWPWSHGRAVGGAAALKPWLDSLARACGCTTIRLDAGDEMQGTLLSNFGFGLPAITAMNAFGIDAAAIGNHEFDWSVDTLRARMAGARYRFLAANISDTTGTARPGWAEPWTLISRGGLKIAVIGLALKATPTNTTPRNVQGLAFGDGAAAVRRVLPQARAAADFVIVVAHEGAFCDGPPATDPVPAPACHGDILDIARGLDSASVDLIVSGHTHSLVNTVVNGIPIVQARSSGAGIAVVDFVRLRGTKRQVRARIETPYTDQVRPDAALGDTLRVYQRAIETVRSRPVARVKVELRRTGQEYGLGRLIADAQRNVAQADVAIVNNGGIRADLAAGAVTYGDLYEVQPFQNRLVRLLATGKVLKEALEHVVAGDRADAHVSGLEVWYDPGKRAGRRVTKLTLADGRGVDDGRTYTVAVSDFLAAGGSGFTMLRGLPADDAGLVDLDALIRYLSELRSPVEPPADERIHRAR*