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13_1_40cm_4_scaffold_8914_14

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 14697..15896

Top 3 Functional Annotations

Value Algorithm Source
rpoD; RNA polymerase sigma factor rpoD; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 399.0
  • Bit_score: 618
  • Evalue 9.40e-174
RNA polymerase sigma factor id=3388592 bin=GWC2_Methylomirabilis_70_24 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 400.0
  • Bit_score: 576
  • Evalue 2.90e-161
rpoD; RNA polymerase sigma factor rpoD (Sigma-80) similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 452.0
  • Bit_score: 354
  • Evalue 3.00e-95

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGGCTCTGCGAGCGCTCCTCGACGTCGGGGACCGCCTGCGTCACGAGCACATCGCGGCAGACGACGTCATCGTCCTCCCCGAGGGCGGTGAACTGGACGCTGGCGAGATCAAGCGCGTCCTGGCCGCCTTCGCGCGGATCCGTCGGCTGGAGCGCGAGATCGACCGGCTTTACCAGTCGCTGCGGGACAAGCGGCGCTCGGCCACGACCCGGGCGAACTACGCGAAGTGGATCGCCGCCAACCGCGAAGCTATTCAGAAGGTCGTGGCCGAGATGCCGCTCAAGCCGGCACTCATCGACGACCTGGTGGCTCGGATCCGGCGGCAGTGCGACCGAATCGAGCAACTCAGCGCCGAGGCCCGCCGTGGCAAGAGCCACGTCATGGCCCGCGAGGCCCGCCACCTCGAGCGCGAGGTCGGCCTGCCCCGCCGTCAGCTCCAGGCGCTGCTCACCGACATCGCCCGCAGCGATCGAGAGGTGCGCCAGGCCAAGAAGGAATTGATGGAGGCGAACCTTCGCCTCGTCGTCTCCGTGGCCAAGCGCTACCTGGGGAGCGACCTGAGCCTGCTCGACCTCATCCAGGAGGGCAACATCGGGCTCATGAAGGCGGTGGACCGTTTCCAGTACCGCCGCGGCTTCAAGTTTTCCACCTACGCCACTTGGTGGATCCGTCAGGCGATCACTCGCGCCATCGCCGACCACTCGCGGACGATCCGGATCCCCGTCCACATGGTCGAGACGCTCAACCGGATCTCGCGGGTGAACCGGGCGATGGTCAACGAGTTGGGCCGGGAACCCACGCCCGAGGAATTGGCCCAGCGCACCGGTGTGCCGGCCAAGAAGGTGCGGCTCATCCTGGAGTCGTCGCGCAAGCCTCTCTCGCTGGAGACCCCGATCGGCGAGGATTCCGAGCTGGGCGACTTCCTCGAGGACAAGTCGGCGGGCTCGCCGAACGATACGCTGTTGAGCCAGGACCTCTCGACCCAGGTGGAGCGGGCGCTGGCCATGCTCTCGCCGAAAGAGAAGGAGATCCTCCGCCTCCGGTTCGGCATCGGTGAGGAAGGCGAGCACACCCTCGAGGAGGTCGGCAAGCGCTTCGCCGTGACGCGTGAGCGCATCCGGCAGATCGAGGCCAAGGCGCTGCGCAAGTTGCGACACCCGCTGCGCGGACGGAACCTCAAAGCCTTCGTAGAAAATTAA
PROTEIN sequence
Length: 400
MALRALLDVGDRLRHEHIAADDVIVLPEGGELDAGEIKRVLAAFARIRRLEREIDRLYQSLRDKRRSATTRANYAKWIAANREAIQKVVAEMPLKPALIDDLVARIRRQCDRIEQLSAEARRGKSHVMAREARHLEREVGLPRRQLQALLTDIARSDREVRQAKKELMEANLRLVVSVAKRYLGSDLSLLDLIQEGNIGLMKAVDRFQYRRGFKFSTYATWWIRQAITRAIADHSRTIRIPVHMVETLNRISRVNRAMVNELGREPTPEELAQRTGVPAKKVRLILESSRKPLSLETPIGEDSELGDFLEDKSAGSPNDTLLSQDLSTQVERALAMLSPKEKEILRLRFGIGEEGEHTLEEVGKRFAVTRERIRQIEAKALRKLRHPLRGRNLKAFVEN*