name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_40cm_4_scaffold_8914_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(1..1095)
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pyrH; uridylate kinase (EC:2.7.4.22)
tsf; elongation factor Ts; K02357 elongation factor Ts Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uridylate kinase id=2265663 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_8914_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(1100..1861)
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30S ribosomal protein S2 id=2265661 bin=GWA2_Methylomirabilis_73_35 species=Salimicrobium sp. MJ3 genus=Salimicrobium taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=GWA2_Rokubacteria_73_35_curated
rpsB; 30S ribosomal protein S2
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13_1_40cm_4_scaffold_8914_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
comp(1944..3188)
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arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_cur
Arginine biosynthesis bifunctional protein ArgJ id=2265660 bin=GWA2_Methylomirabilis_73_35 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ArgJ; N-acetylglutamate synthase
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13_1_40cm_4_scaffold_8914_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(3188..4237)
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argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] Tax=GWA2_Rokubacteria_73_35_curated
argC; n-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase id=2265658 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_8914_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria
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Not on your lists |
comp(4254..4511)
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||
13_1_40cm_4_scaffold_8914_6
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria
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Not on your lists |
comp(5141..6355)
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Putative uncharacterized protein id=4761815 bin=GWA2_Elusimicrobia_69_24 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
G-D-S-L family lipolytic protein Tax=GWA2_Elusimicrobia_69_24_curated
lipolytic protein G-D-S-L family
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13_1_40cm_4_scaffold_8914_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria
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Not on your lists |
comp(6331..6987)
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nth; endonuclease III (EC:4.2.99.18) id=14625396 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
nth; endonuclease III (EC:4.2.99.18) Tax=CSP1_6_Rokubacteria
nth; endonuclease III (EC:4.2.99.18)
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13_1_40cm_4_scaffold_8914_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
comp(6984..9056)
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Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=2265650 bin=GWA2_Methylomirabilis_73_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase family protein
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13_1_40cm_4_scaffold_8914_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(9076..9795)
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methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Methyltransferase id=2265648 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
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13_1_40cm_4_scaffold_8914_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria
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Not on your lists |
comp(9801..10226)
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Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBV3_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40712.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
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13_1_40cm_4_scaffold_8914_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(10223..11356)
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Aminotransferase class I and II id=2265644 bin=GWA2_Methylomirabilis_73_35 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aspartate aminotransferase Tax=GWA2_Rokubacteria_73_35_curated
aspartate aminotransferase
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13_1_40cm_4_scaffold_8914_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(11374..12075)
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glycosyl transferase family 2 protein (EC:2.4.1.-); K00729 dolichyl-phosphate beta-glucosyltransferase [EC:2.4.1.117] Tax=GWA2_Rokubacteria_73_35_curated
glycosyl transferase family 2 protein (EC:2.4.1.-)
Glycosyl transferase, family 2 id=2265642 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_8914_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(12700..14136)
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malate dehydrogenase; K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
malate dehydrogenase; K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] id=14625391 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
malate dehydrogenase (EC:1.1.1.38)
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13_1_40cm_4_scaffold_8914_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
14697..15896
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rpoD; RNA polymerase sigma factor rpoD; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RNA polymerase sigma factor id=3388592 bin=GWC2_Methylomirabilis_70_24 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rpoD; RNA polymerase sigma factor rpoD (Sigma-80)
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13_1_40cm_4_scaffold_8914_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
comp(15975..17501)
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propionyl-CoA carboxylase (EC:6.4.1.3) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
propionyl-CoA carboxylase (EC:6.4.1.3)
Propionyl-CoA carboxylase id=4153737 bin=GWC2_Methylomirabilis_70_16 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
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13_1_40cm_4_scaffold_8914_16
CSP1_6_Rokubacteria, Rokubacteria, Bacteria
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Not on your lists |
comp(17504..18019)
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DinB family protein id=14625385 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
DinB family protein Tax=CSP1_6_Rokubacteria
DinB family protein
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13_1_40cm_4_scaffold_8914_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
comp(18582..18797)
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biotin/lipoic acid binding domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Biotin/lipoyl attachment domain-containing protein id=4748228 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
biotin/lipoyl attachment domain-containing protein
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13_1_40cm_4_scaffold_8914_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(18790..20085)
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biotin carboxylase (EC:6.3.4.14 6.4.1.1); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Carbamoyl-phosphate synthase L chain ATP-binding protein id=4748227 bin=GWA2_Methylomirabilis_73_35 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Carbamoyl-phosphate synthase L chain ATP-binding protein
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13_1_40cm_4_scaffold_8914_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(20136..21095)
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hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Uncharacterized protein id=3782407 bin=GWF2_Methylomirabilis_70_14 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
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13_1_40cm_4_scaffold_8914_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
comp(21106..21861)
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hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4375090 bin=GWC2_Methylomirabilis_70_24 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
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13_1_40cm_4_scaffold_8914_21
unknown
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Not on your lists |
22188..22742
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This feature has no annotations |
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13_1_40cm_4_scaffold_8914_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(23638..23820)
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Excisionase/Xis, DNA-binding protein id=4848467 bin=GWA2_Methylomirabilis_73_35 species=Nitrosococcus oceani genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Excisionase/Xis, DNA-binding protein Tax=GWA2_Rokubacteria_73_35_curated
excisionase
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13_1_40cm_4_scaffold_8914_23
R_Rokubacteria_69_13, Rokubacteria, Bacteria
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Not on your lists |
comp(23817..24482)
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cysE; serine acetyltransferase (EC:2.3.1.30) id=14625374 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
cysE; serine acetyltransferase (EC:2.3.1.30) Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
cysE; serine acetyltransferase (EC:2.3.1.30)
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13_1_40cm_4_scaffold_8914_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
comp(24475..24855)
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FeS cluster assembly scaffold protein NifU; K04488 nitrogen fixation protein NifU and related proteins Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
nifU; FeS cluster assembly scaffold protein NifU; K04488 nitrogen fixation protein NifU and related proteins id=14625373 bin=bin7_NC10_sister species=Oscillibacter sp. 1-3 genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
FeS cluster assembly scaffold protein NifU
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13_1_40cm_4_scaffold_8914_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(24852..26009)
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cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase id=4206292 bin=GWF2_Methylomirabilis_70_14 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_8914_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
26052..26375
|
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=3714008 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
|
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13_1_40cm_4_scaffold_8914_27
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria
|
Not on your lists |
26377..26730
|
Putative uncharacterized protein id=4806444 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
|
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13_1_40cm_4_scaffold_8914_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
26730..26954
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=3714012 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_8914_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(26965..27171)
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Putative uncharacterized protein id=3714014 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
iscX; iron-sulfur cluster assembly protein IscX
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13_1_40cm_4_scaffold_8914_30
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(27168..27491)
|
fdx; ferredoxin, 2Fe-2S type, ISC system; K04755 ferredoxin, 2Fe-2S Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Ferredoxin, 2Fe-2S type, ISC system id=3714016 bin=GWA2_Methylomirabilis_73_35 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fdx; ferredoxin, 2Fe-2S type, ISC system
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