ggKbase home page

13_1_40cm_4_scaffold_920_14

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(17504..17848)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase, subunit K/omega (EC:2.7.7.6); K03014 DNA-directed RNA polymerases I, II, and III subunit RPABC2 Tax=RBG_13_Bathyarchaeota_38_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 106.0
  • Bit_score: 116
  • Evalue 3.30e-23
Putative RNA polymerase Rpb6 n=1 Tax=uncultured marine crenarchaeote HF4000_APKG6C9 RepID=B3T8Y5_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 95.0
  • Bit_score: 91
  • Evalue 6.30e-16
RNA polymerase Rpb6 similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 95.0
  • Bit_score: 93
  • Evalue 3.60e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Bathyarchaeota_38_9_curated → Bathyarchaeota → Archaea

Sequences

DNA sequence
Length: 345
GTGGACCGAAGGGAAAGGACGAGGGTGACGACGAGGGAAGCAGCGATTACTAGAGAGCCCGACAGCATCGAGATCGGACCCCCAAAACTCACACGCTTCGAGAAAGCGAGAGTAGTAGGGGCTAGGGCACTTCAGATATCAATGGGAGCCCCGGTTCTCCTCGACTTGAAGCAAGGGTTGCTGTCGCCGATTGATGTAGCTCTGCTGGAATTGGAAGAAGGCGTCCTCCCGATCAGCATCCGTCGAGCATTGCCCGATGGAACCAGCCAGAACATCCCATTGAAATGGCTCCTCCATCCCGCGGACGAAGAGAAGAAGCCTAGATCAAAGAGGGAAGACGAATAG
PROTEIN sequence
Length: 115
VDRRERTRVTTREAAITREPDSIEIGPPKLTRFEKARVVGARALQISMGAPVLLDLKQGLLSPIDVALLELEEGVLPISIRRALPDGTSQNIPLKWLLHPADEEKKPRSKREDE*