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13_1_40cm_4_scaffold_920

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_920_trna_1
unknown

Not on your lists

comp(1..76)
DNA (76bp)
transferRNA
13_1_40cm_4_scaffold_920_1
unknown

Not on your lists

402..1097
DNA (696bp) protein (232aa)

This feature has no annotations

13_1_40cm_4_scaffold_920_2
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(1331..1933)
DNA (603bp) protein (201aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_4_scaffold_920_3
unknown

Not on your lists

2144..2983
DNA (840bp) protein (280aa)

This feature has no annotations

13_1_40cm_4_scaffold_920_4
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

2987..5788
DNA (2802bp) protein (934aa)
AAA family ATPase, CDC48 subfamily n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QP14_VULDI
cdc48-2; AAA family ATPase; K13525 transitional endoplasmic reticulum ATPase Tax=RBG_16_Thaumarchaeota_49_8_curated
ATPase AAA
13_1_40cm_4_scaffold_920_5
unknown

Not on your lists

5923..6126
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_4_scaffold_920_6
Metallosphaera sedula, Metallosphaera, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(6706..7926)
DNA (1221bp) protein (407aa)
GMP synthase (EC:6.3.5.2)
GMP synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:AIM26364.1}; EC=6.3.5.2 {ECO:0000313|EMBL:AIM26364.1};; TaxID=43687 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; M
GMP synthase (Glutamine-hydrolyzing) n=1 Tax=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) RepID=A4YD75_METS5
13_1_40cm_4_scaffold_920_7
unknown

Not on your lists

8053..8352
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_40cm_4_scaffold_920_8
Saccharomyces cerevisiae, Saccharomyces, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

8507..12661
DNA (4155bp) protein (1385aa)
Putative glucanase n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N4L2_KITSK
hypothetical protein
Dan4p {ECO:0000313|EMBL:AJV43772.1}; TaxID=1294358 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces.;" source="Sa
13_1_40cm_4_scaffold_920_9
Facklamia hominis, Facklamia, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13185..13841)
DNA (657bp) protein (219aa)
Methanosarcina family methyltransferase cognate corrinoid protein n=2 Tax=Facklamia hominis RepID=K1LWT5_9LACT
Methanosarcina family methyltransferase cognate corrinoid protein {ECO:0000313|EMBL:EKB54538.1}; TaxID=883111 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae; Facklamia.;" sourc
cobalamin B12-binding domain-containing protein
13_1_40cm_4_scaffold_920_10
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13831..14670)
DNA (840bp) protein (280aa)
FadB; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=2 Tax=Caldanaerobacter subterraneus RepID=U5CPL6_THEYO
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:KKC30380.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="C
13_1_40cm_4_scaffold_920_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(14689..15399)
DNA (711bp) protein (237aa)
hypothetical protein
Restriction endonuclease family protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_4_scaffold_920_12
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(15410..16630)
DNA (1221bp) protein (407aa)
Putative peptidase M50 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJV2_NITGG
peptidase M50 Tax=RBG_16_Archaea_50_20_curated
peptidase M50
13_1_40cm_4_scaffold_920_13
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

16762..17262
DNA (501bp) protein (167aa)
Acetyltransferase n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAU7_9CREN
ribosomal-protein-alanine acetyltransferase Tax=RBG_16_Archaea_50_20_curated
ribosomal-protein-alanine acetyltransferase
13_1_40cm_4_scaffold_920_14
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(17504..17848)
DNA (345bp) protein (115aa)
DNA-directed RNA polymerase, subunit K/omega (EC:2.7.7.6); K03014 DNA-directed RNA polymerases I, II, and III subunit RPABC2 Tax=RBG_13_Bathyarchaeota_38_9_curated
Putative RNA polymerase Rpb6 n=1 Tax=uncultured marine crenarchaeote HF4000_APKG6C9 RepID=B3T8Y5_9ARCH
RNA polymerase Rpb6
13_1_40cm_4_scaffold_920_15
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(17796..19541)
DNA (1746bp) protein (582aa)
Thermosome subunit n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T9L4_9ARCH
thsA4; archaeal thermosome Tax=RBG_13_Bathyarchaeota_46_16b_curated
thsA; archaeal thermosome
13_1_40cm_4_scaffold_920_16
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

19763..20914
DNA (1152bp) protein (384aa)
Putative aminotransferase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWZ6_METPS
putative pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Tax=RBG_13_Bathyarchaeota_38_9_curated
putative aminotransferase
13_1_40cm_4_scaffold_920_17
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(20929..22242)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LMI9_THEBM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADT83968.1}; TaxID=391623 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus barophilus (stra
13_1_40cm_4_scaffold_920_18
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

22313..22699
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B992_METTP
hypothetical protein; K09143 hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_4_scaffold_920_19
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(22696..23028)
DNA (333bp) protein (111aa)
30S ribosomal protein S25e n=3 Tax=Sulfolobus acidocaldarius RepID=M1IBE2_9CREN
30S ribosomal protein S25 Tax=RBG_13_Bathyarchaeota_38_9_curated
30S ribosomal protein S25e
13_1_40cm_4_scaffold_920_20
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(23278..24060)
DNA (783bp) protein (261aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=RBG_16_Thaumarchaeota_49_8_curated
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP18_NITGG
13_1_40cm_4_scaffold_920_21
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(24057..25016)
DNA (960bp) protein (320aa)
myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=RBG_13_Bathyarchaeota_38_9_curated
myo-inositol-1-phosphate synthase (EC:5.5.1.4)
Myo-inositol-1-phosphate synthase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIH4_NITGG
13_1_40cm_4_scaffold_920_22
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(25180..25887)
DNA (708bp) protein (236aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_920_23
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(25964..26713)
DNA (750bp) protein (250aa)
F420-dependent oxidoreductase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] Tax=RBG_16_Archaea_50_20_curated
F420-dependent oxidoreductase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDA3_THET1
F420-dependent oxidoreductase
13_1_40cm_4_scaffold_920_24
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(26721..29303)
DNA (2583bp) protein (861aa)
DNA polymerase I (EC:2.7.7.7) Tax=RBG_16_Archaea_50_20_curated
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=uncultured Candidatus Nitrosocaldus sp. RepID=Q1ERA4_9CREN
13_1_40cm_4_scaffold_920_25
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

29363..30679
DNA (1317bp) protein (439aa)
sun protein (fmu protein); K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein n=1 Tax=Paenibacillus massiliensis RepID=UPI0003828919
sun protein
13_1_40cm_4_scaffold_920_26
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30738..31952)
DNA (1215bp) protein (405aa)
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1; Short=BPG-independent PGAM 1;; Short=Phosphoglyceromutase 1;; Short=aPGAM 1;; EC=5.4.2.12;; TaxID=187420 species="Archaea; Euryarchaeota;
2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=APGM1_METTH
Displaying 27 items

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