ggKbase home page

13_1_40cm_4_scaffold_952_9

Organism: 13_1_40cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(5100..5699)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family id=24480312 bin=RBG_19FT_COMBO_GAL15_69_19 species=Streptomyces griseoaurantiacus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 182.0
  • Bit_score: 143
  • Evalue 3.20e-31
RNA polymerase sigma factor, sigma-70 family Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 183.0
  • Bit_score: 143
  • Evalue 4.40e-31
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 181.0
  • Bit_score: 136
  • Evalue 1.10e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Armatimonadetes_69_19_curated → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 600
ATGGCCCAGTCGGAGGAGGTTCCCTCAACCGAGGGGGATGCCGAGGAACGCCGGTTGATCGATCGGAGCGCGGCGGGGGACCAGGAGGCCTTCCGCCAGCTCGTGCTCCGCTATCACCGGCTGGTGATCAACGTTGCCTTCCGAGCGCTGGGCGAGGTCGCGCTCGCCGAAGACGTGGCCCAGGACGTCTTTGTCAAGGTTTACAAGGCGCTGCCGACCTACCGCCACGACAAACCGTTCAAGCACTGGCTGCACCGGGTGGCAGCGAATACGGTGACCGACTCGCTCCGGCGACGGCGGCCGGTGGTGTCGCTCGACGGGCTCGACCAGCCACTCGTCAGCGCCGGCTCCGATCCACAGGACATCGCGGCTCGCCATGACCTGCAGCGGGCCGTCCGTCACGCGATCGCGAGTCTGCCGCCACATTACCGTGACACCATCGCCCTGCAGGCCTTTGGCGAGCTCAGCTACGACGAGATCGCCAAAGCCCTTGACATTCCGCTCGGCACCGTGATGTCGCGGTTGAACGGGGCAAAGCGCCTGCTCCGGGAGCACCTGGGTGACCTCGTTCGCCCGTCGGAGGAGGCGAATACGGCGTGA
PROTEIN sequence
Length: 200
MAQSEEVPSTEGDAEERRLIDRSAAGDQEAFRQLVLRYHRLVINVAFRALGEVALAEDVAQDVFVKVYKALPTYRHDKPFKHWLHRVAANTVTDSLRRRRPVVSLDGLDQPLVSAGSDPQDIAARHDLQRAVRHAIASLPPHYRDTIALQAFGELSYDEIAKALDIPLGTVMSRLNGAKRLLREHLGDLVRPSEEANTA*