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13_1_40cm_4_scaffold_952

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_952_1
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..582
DNA (582bp) protein (194aa)
Glucose-inhibited division protein A n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4HXV9_MYCRH
Glucose-inhibited division protein A {ECO:0000313|EMBL:EHB56451.1}; TaxID=931627 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesia
FAD-dependent oxidoreductase
13_1_40cm_4_scaffold_952_2
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(579..1331)
DNA (753bp) protein (251aa)
ABC transporter n=1 Tax=Streptomyces RepID=UPI00035D10B5
Arginine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKA37218.1}; TaxID=1354891 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces s
ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_952_3
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1348..2316)
DNA (969bp) protein (323aa)
Putative amino acid ABC transporter permease protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NGV2_KITSK
ABC transporter permease {ECO:0000313|EMBL:KJY37175.1}; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
atrB; amino acid ABC transporter permease
13_1_40cm_4_scaffold_952_4
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2334..3290)
DNA (957bp) protein (319aa)
arginine ABC transporter substrate-binding protein n=1 Tax=Patulibacter americanus RepID=UPI0003B7375C
Amino acid ABC transporter substrate-binding protein, PAAT family {ECO:0000313|EMBL:KJE22950.1}; Flags: Precursor;; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;"
family 3 extracellular solute-binding protein
13_1_40cm_4_scaffold_952_5
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3353..3670
DNA (318bp) protein (106aa)
agmatinase (EC:3.5.3.11)
agmatinase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000289A5E2
Agmatinase {ECO:0000313|EMBL:EAR25729.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
13_1_40cm_4_scaffold_952_6
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(3678..4223)
DNA (546bp) protein (182aa)
hypothetical protein id=24443964 bin=RBG_19FT_COMBO_GAL15_69_19 species=Schlesneria paludicola genus=Schlesneria taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Phosphoesterase MutT/NUDIX family
13_1_40cm_4_scaffold_952_7
unknown

Not on your lists

comp(4269..4712)
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_40cm_4_scaffold_952_8
unknown

Not on your lists

comp(4730..5062)
DNA (333bp) protein (111aa)

This feature has no annotations

13_1_40cm_4_scaffold_952_9
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(5100..5699)
DNA (600bp) protein (200aa)
RNA polymerase sigma factor, sigma-70 family id=24480312 bin=RBG_19FT_COMBO_GAL15_69_19 species=Streptomyces griseoaurantiacus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
RNA polymerase sigma factor, sigma-70 family Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_4_scaffold_952_10
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(5746..6519)
DNA (774bp) protein (258aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=RBG_16_Chloroflexi_68_14_curated
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EH71_9CHLR
13_1_40cm_4_scaffold_952_11
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(6548..7750)
DNA (1203bp) protein (401aa)
tryptophan synthase subunit beta (EC:4.2.1.20); K01696 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RBG_16_Chloroflexi_68_14_curated
Tryptophan synthase beta chain n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBJ2_THET1
tryptophan synthase subunit beta
13_1_40cm_4_scaffold_952_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(7747..8361)
DNA (615bp) protein (205aa)
N-(5'-phosphoribosyl)anthranilate isomerase; K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] Tax=RBG_16_Acidobacteria_70_10_curated
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K8E3_HALHC
phosphoribosylanthranilate isomerase
13_1_40cm_4_scaffold_952_13
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8358..9149)
DNA (792bp) protein (264aa)
Indole-3-glycerol-phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] Tax=RBG_13_Deltaproteobacteria_61_14_curated
indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase id=4362883 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
13_1_40cm_4_scaffold_952_14
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(9168..10346)
DNA (1179bp) protein (393aa)
aspartate/tyrosine/aromatic aminotransferase id=24475222 bin=RBG_19FT_COMBO_GAL15_69_19 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
aspartate/tyrosine/aromatic aminotransferase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
aspartate/tyrosine/aromatic aminotransferase
13_1_40cm_4_scaffold_952_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10351..10656)
DNA (306bp) protein (102aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rh
Acylphosphatase n=2 Tax=Rhodothermus marinus RepID=D0MJN8_RHOM4
acylphosphatase
13_1_40cm_4_scaffold_952_16
unknown

Not on your lists

comp(10713..10976)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_4_scaffold_952_17
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

11021..12178
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMU1_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH87091.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_40cm_4_scaffold_952_18

Not on your lists

comp(12090..12644)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI0003753280
Putative cobalamin adenosyltransferase {ECO:0000313|EMBL:ABZ06276.1}; TaxID=455512 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_008B14.;"
ATP/cobalamin adenosyltransferase
13_1_40cm_4_scaffold_952_19
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(12725..13228)
DNA (504bp) protein (168aa)
putative ADP-ribose pyrophosphatase (EC:3.6.1.13) Tax=RBG_13_Chloroflexi_68_17_curated
putative ADP-ribose pyrophosphatase (EC:3.6.1.13) id=1245820 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative ADP-ribose pyrophosphatase
13_1_40cm_4_scaffold_952_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13225..13782)
DNA (558bp) protein (186aa)
BioY protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I693_SULAT
BioY protein; K03523 putative biotin biosynthesis protein BioY Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
BioY protein
13_1_40cm_4_scaffold_952_21
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13800..14654)
DNA (855bp) protein (285aa)
thymidylate synthase, flavin-dependent (EC:2.1.1.148); K03465 thymidylate synthase (FAD) [EC:2.1.1.148] Tax=RBG_16_Anaeromyxobacter_69_14_curated
Thymidylate synthase ThyX n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H9J9_ANADF
thymidylate synthase, flavin-dependent
13_1_40cm_4_scaffold_952_22
unknown

Not on your lists

14754..15128
DNA (375bp) protein (125aa)

This feature has no annotations

13_1_40cm_4_scaffold_952_23
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15160..16500
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI0003770C88
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACQ80960.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strai
13_1_40cm_4_scaffold_952_24
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(16454..17086)
DNA (633bp) protein (211aa)
Cyclase family protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EGI3_9CHLR
Cyclase family protein {ECO:0000313|EMBL:CCF83795.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source=
putative cyclase
13_1_40cm_4_scaffold_952_25
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17083..18972)
DNA (1890bp) protein (630aa)
glycogen debranching protein (EC:3.2.1.33)
glycogen-debranching protein, partial n=1 Tax=Chlorogloeopsis sp. PCC 9212 RepID=UPI0003630B1F
Putative glycogen debranching enzyme {ECO:0000313|EMBL:ERT08429.1}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
13_1_40cm_4_scaffold_952_26
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18980..19975)
DNA (996bp) protein (332aa)
dhg; glucose 1-dehydrogenase (EC:1.1.1.47)
Glucose 1-dehydrogenase {ECO:0000255|HAMAP-Rule:MF_02127}; Short=GDH {ECO:0000255|HAMAP-Rule:MF_02127};; Short=GlcDH {ECO:0000255|HAMAP-Rule:MF_02127};; EC=1.1.1.47 {ECO:0000255|HAMAP-Rule:MF_02127};;
Glucose 1-dehydrogenase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=GLCDH_UNCMA
13_1_40cm_4_scaffold_952_27
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

comp(20101..20796)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037AE74B
type 11 methyltransferase
Tax=BJP_IG2069_Chloroflexi_70_12
13_1_40cm_4_scaffold_952_28
unknown

Not on your lists

comp(20786..21427)
DNA (642bp) protein (214aa)

This feature has no annotations

13_1_40cm_4_scaffold_952_29
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(21612..21983)
DNA (372bp) protein (124aa)
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
molecular chaperone; K13993 HSP20 family protein
13_1_40cm_4_scaffold_952_30
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21988..23262)
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Streptomyces sp. HmicA12 RepID=UPI00036AC1A1
Uncharacterized protein {ECO:0000313|EMBL:EPD68903.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
hypothetical protein
Displaying items 1-30 of 33 in total

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