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13_2_20cm_2_scaffold_122

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_122_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2..1342
DNA (1341bp) protein (447aa)
GTPase HflX n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C4_GEMAT
GTP-binding protein, HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708
13_2_20cm_2_scaffold_122_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1637..3319
DNA (1683bp) protein (561aa)
Ig domain protein group 2 domain protein
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:AHG91641.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Uncharacterized protein id=3456947 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
13_2_20cm_2_scaffold_122_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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3316..4464
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037D6254
phosphoesterase
Phosphoesterase {ECO:0000313|EMBL:ABF40619.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versat
13_2_20cm_2_scaffold_122_4
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

4498..6900
DNA (2403bp) protein (801aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003819787 rbh
Putative uncharacterized protein Tax=RBG_16_Chloroflexi_48_8_curated
hypothetical protein
13_2_20cm_2_scaffold_122_5
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6955..9219)
DNA (2265bp) protein (755aa)
Alkaline phosphatase {ECO:0000313|EMBL:CCH17161.1}; EC=3.1.3.1 {ECO:0000313|EMBL:CCH17161.1};; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;"
Alkaline phosphatase (EC:3.1.3.1)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000382B79C
13_2_20cm_2_scaffold_122_6
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(9398..10711)
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI000377CDEE rbh
group 1 glycosyl transferase Tax=RBG_16_Caldithrix_48_16_curated
group 1 glycosyl transferase
13_2_20cm_2_scaffold_122_7
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(10708..11688)
DNA (981bp) protein (327aa)
Polysaccharide deacetylase domain protein id=2512882 bin=GWC2_Chloroflexi_73_18 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
polysaccharide deacetylase Tax=GWC2_RIF_CHLX_73_18_curated
polysaccharide deacetylase
13_2_20cm_2_scaffold_122_8
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(11699..12940)
DNA (1242bp) protein (414aa)
Hydrolase, exosortase system type 1 associated id=2512884 bin=GWC2_Chloroflexi_73_18 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
hypothetical protein Tax=GWC2_RIF_CHLX_73_18_curated
hypothetical protein
13_2_20cm_2_scaffold_122_9

Not on your lists

comp(12933..13637)
DNA (705bp) protein (235aa)
Marine sediment metagenome DNA, contig: S01H1_L04771 {ECO:0000313|EMBL:GAF70877.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Thymidylate kinase id=2512886 bin=GWC2_Chloroflexi_73_18 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_2_20cm_2_scaffold_122_10
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

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comp(13649..15109)
DNA (1461bp) protein (487aa)
O-antigen polymerase Tax=RBG_16_Caldithrix_48_16_curated
O-antigen polymerase id=2868574 bin=GWC2_Chloroflexi_73_18 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
O-antigen polymerase
13_2_20cm_2_scaffold_122_11
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(15115..16287)
DNA (1173bp) protein (391aa)
glycosyl transferase, family II Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
Glycosyl transferase, family II id=2868576 bin=GWC2_Chloroflexi_73_18 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
CESA-like subfamily glycosyltransferase
13_2_20cm_2_scaffold_122_12
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(16298..17020)
DNA (723bp) protein (241aa)
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6) Tax=RBG_16_Caldithrix_48_16_curated
UDP-phosphate galactose phosphotransferase (EC:2.7.8.6)
Undecaprenyl-phosphate galactose phosphotransferase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NNM1_ROSCS
13_2_20cm_2_scaffold_122_13
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(17030..17755)
DNA (726bp) protein (242aa)
Tax=RBG_16_Caldithrix_48_16_curated
13_2_20cm_2_scaffold_122_14
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

17963..19078
DNA (1116bp) protein (372aa)
HPr kinase id=2512896 bin=GWC2_Chloroflexi_73_18 species=Geodermatophilus obscurus genus=Geodermatophilus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
HPr kinase Tax=GWC2_RIF_CHLX_73_18_curated
HPr kinase
13_2_20cm_2_scaffold_122_15
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19088..20641)
DNA (1554bp) protein (518aa)
Polysaccharide biosynthesis protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBE8_NITWC rbh
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KJS11981.1}; TaxID=1629715 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.;"
polysaccharide biosynthesis protein
13_2_20cm_2_scaffold_122_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20975..23392
DNA (2418bp) protein (806aa)
Putative exopolysaccharide biosynthesis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W1_GEMAT
putative exopolysaccharide biosynthesis protein
Putative exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:BAH37621.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimon
13_2_20cm_2_scaffold_122_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

23429..24256
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W2_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_2_scaffold_122_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

24275..25261
DNA (987bp) protein (329aa)
nucleoside-diphosphate-sugar epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G3_GEMAT
nucleoside-diphosphate-sugar epimerase
13_2_20cm_2_scaffold_122_19
unknown

Not on your lists

25339..26364
DNA (1026bp) protein (342aa)

This feature has no annotations

13_2_20cm_2_scaffold_122_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(27363..28544)
DNA (1182bp) protein (394aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5V9_GEMAT
ATP-binding region ATPase domain protein
13_2_20cm_2_scaffold_122_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(28541..29440)
DNA (900bp) protein (300aa)
NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W0_GEMAT
NtrC family two-component response regulator
NtrC family two-component response regulator {ECO:0000313|EMBL:BAH37620.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas
13_2_20cm_2_scaffold_122_22
unknown

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29836..30066
DNA (231bp) protein (77aa)

This feature has no annotations

13_2_20cm_2_scaffold_122_23
unknown

Not on your lists

comp(30253..30528)
DNA (276bp) protein (92aa)

This feature has no annotations

13_2_20cm_2_scaffold_122_24
unknown

Not on your lists

31244..31474
DNA (231bp) protein (77aa)

This feature has no annotations

13_2_20cm_2_scaffold_122_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

31478..33052
DNA (1575bp) protein (525aa)
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_7
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB63_GEMAT
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]
13_2_20cm_2_scaffold_122_26
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

Not on your lists

32998..33153
DNA (156bp) protein (52aa)
glucosamine--fructose-6-phosphate aminotransferase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RBG_16_Zixibacteria_48_11_curated
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=2 Tax=Chloroflexus RepID=A9WE57_CHLAA
glucosamine/fructose-6-phosphate aminotransferase
13_2_20cm_2_scaffold_122_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

33153..34409
DNA (1257bp) protein (419aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Protein kinase n=1 Tax=Mycobacterium thermoresistibile ATCC 19527 RepID=G7CDT8_MYCTH
protein kinase
13_2_20cm_2_scaffold_122_28
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34675..35466)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWS0_SORCE
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:KIG15468.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;
hypothetical protein
Displaying 28 items

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