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13_2_20cm_2_scaffold_12342

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_12342_1
unknown

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1..498
DNA (498bp) protein (166aa)

This feature has no annotations

13_2_20cm_2_scaffold_12342_2
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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542..1780
DNA (1239bp) protein (413aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1) Tax=RBG_16_Euryarchaeota_68_13_curated
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003803334 rbh
13_2_20cm_2_scaffold_12342_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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1811..2455
DNA (645bp) protein (215aa)
mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX (EC:3.1.3.87) Tax=RBG_16_Euryarchaeota_68_13_curated
mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX (EC:3.1.3.87)
2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LGI6_THEPS
13_2_20cm_2_scaffold_12342_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2488..3369
DNA (882bp) protein (294aa)
Sugar kinase, ribokinase family protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T589_9EURY
Sugar kinase, ribokinase family protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Sugar kinase, ribokinase family protein
13_2_20cm_2_scaffold_12342_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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3457..3690
DNA (234bp) protein (78aa)
AsnC family transcriptional regulator n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003794C7E
transcriptional regulator Tax=RBG_16_Euryarchaeota_68_13_curated
transcriptional regulator
13_2_20cm_2_scaffold_12342_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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3702..4016
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T463_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_2_20cm_2_scaffold_12342_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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4087..4557
DNA (471bp) protein (157aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TBP4_9EURY
phosphoribosylaminoimidazole carboxylase catalytic subunit Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
phosphoribosylaminoimidazole carboxylase catalytic subunit
13_2_20cm_2_scaffold_12342_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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4554..5501
DNA (948bp) protein (316aa)
GMP synthase subunit B (EC:6.3.5.2) Tax=RBG_16_Euryarchaeota_67_27_curated
GMP synthase subunit B (EC:6.3.5.2)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035E1670 rbh
13_2_20cm_2_scaffold_12342_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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5573..6145
DNA (573bp) protein (191aa)
GMP synthase subunit A (EC:6.3.5.2) Tax=RBG_16_Euryarchaeota_68_13_curated
GMP synthase subunit A (EC:6.3.5.2)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000379ADE2
13_2_20cm_2_scaffold_12342_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(6395..7024)
DNA (630bp) protein (210aa)
D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=RBG_16_Euryarchaeota_68_13_curated
D-3-phosphoglycerate dehydrogenase n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BCH4_METIK
D-3-phosphoglycerate dehydrogenase
13_2_20cm_2_scaffold_12342_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(6979..7209)
DNA (231bp) protein (77aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=RBG_16_Euryarchaeota_67_27_curated
13_2_20cm_2_scaffold_12342_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(7247..7651)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000362C1DC
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_2_20cm_2_scaffold_12342_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(7676..9943)
DNA (2268bp) protein (756aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003819C5D
Carbamoyl-phosphate synthase large chain Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Carbamoyl-phosphate synthase large chain
13_2_20cm_2_scaffold_12342_14
unknown

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9957..10070
DNA (114bp) protein (38aa)

This feature has no annotations

13_2_20cm_2_scaffold_12342_15
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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10116..10622
DNA (507bp) protein (169aa)
WGS project CAID00000000 data, contig chromosome 08 n=1 Tax=Ostreococcus tauri RepID=Q013E6_OSTTA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK31108.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
13_2_20cm_2_scaffold_12342_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(10689..11771)
DNA (1083bp) protein (361aa)
CarA; carbamoyl phosphate synthase small subunit (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
CarA; carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=CARA_METKA rbh
13_2_20cm_2_scaffold_12342_17
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(11846..12280)
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IE59_ACIB4
hypothetical protein; K09122 hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_2_20cm_2_scaffold_12342_18
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(12298..12933)
DNA (636bp) protein (212aa)
2, 5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HL47_ACIS0
2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase Tax=RBG_16_Euryarchaeota_68_13_curated
2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase
13_2_20cm_2_scaffold_12342_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

13053..13439
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Pseudoalteromonas RepID=UPI000299DF71
OsmC family protein; K07397 putative redox protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
OsmC/Ohr family protein
13_2_20cm_2_scaffold_12342_20
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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13509..14270
DNA (762bp) protein (254aa)
Protein containing DUF75 (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BU48_9ZZZZ
ATP-grasp superfamily enzyme Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_2_20cm_2_scaffold_12342_21
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(15149..17968)
DNA (2820bp) protein (940aa)
calcium-translocating P-type ATPase (EC:3.6.3.8); K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=RBG_16_Euryarchaeota_67_27_curated
Cation transport ATPase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D194_PELTS rbh
MgtA; cation transport ATPase
13_2_20cm_2_scaffold_12342_22
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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18154..19929
DNA (1776bp) protein (592aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000371F843 rbh
sodium/hydrogen exchanger family protein; K03455 monovalent cation:H+ antiporter-2, CPA2 family Tax=RBG_16_Euryarchaeota_67_27_curated
DNA binding protein, DksA/TraR
13_2_20cm_2_scaffold_12342_23
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(19930..20562)
DNA (633bp) protein (211aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NAJ3_9CLOT
GloB; Zn-dependent hydrolases Tax=RBG_16_Euryarchaeota_67_27_curated
beta-lactamase domain-containing protein
13_2_20cm_2_scaffold_12342_24
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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20649..20807
DNA (159bp) protein (53aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_2_20cm_2_scaffold_12342_trna_1
unknown

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comp(20873..20970)
DNA (98bp)
transferRNA
13_2_20cm_2_scaffold_12342_25
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(21566..21820)
DNA (255bp) protein (85aa)
UPF0147 protein MMINT_16370 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8A0_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_2_20cm_2_scaffold_12342_26
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(21851..22171)
DNA (321bp) protein (107aa)
Transcriptional regulator, AsnC family n=1 Tax=mine drainage metagenome RepID=T1BG18_9ZZZZ
transcriptional regulator, AsnC family protein Tax=RBG_16_Euryarchaeota_68_13_curated
transcriptional regulator, AsnC family protein
13_2_20cm_2_scaffold_12342_27
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(22220..23053)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036C2000
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 28 items

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