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13_2_20cm_2_scaffold_1292

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1292_1
Thermogladius cellulolyticus, Thermogladius, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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3..536
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Thermogladius cellulolyticus (strain 1633) RepID=I3TFJ4_THEC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK51532.1}; TaxID=1184251 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Thermogladius.;" source="Thermogladius cellul
13_2_20cm_2_scaffold_1292_2
R_OP3X_45_10, OP3X, Bacteria

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521..1402
DNA (882bp) protein (294aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11) Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R9H9_AMMDK
13_2_20cm_2_scaffold_1292_3
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1407..2330
DNA (924bp) protein (308aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae;
2-dehydropantoate 2-reductase n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TC11_HELMI
panE; 2-dehydropantoate 2-reductase
13_2_20cm_2_scaffold_1292_4
R_OD1_Giovannonibacteria_45_23, Giovannonibacteria, Parcubacteria, Bacteria

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3070..3786
DNA (717bp) protein (239aa)
Nucleotidyl transferase n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QSY6_VULDI
nucleotidyl transferase Tax=RIFCSPHIGHO2_01_FULL_OD1_Giovannonibacteria_45_23_curated
nucleotidyl transferase
13_2_20cm_2_scaffold_1292_5
CG_Pacearch_01, Pacearchaeota, Archaea

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3783..4742
DNA (960bp) protein (320aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=CG_Pacearch_01
NAD-dependent epimerase/dehydratase n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YWV2_9EURY
NAD-dependent epimerase/dehydratase
13_2_20cm_2_scaffold_1292_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(4971..5216)
DNA (246bp) protein (82aa)
Protein translation factor SUI1 homolog n=1 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A1S8_FERFK
translation initiation factor aSUI1 Tax=RBG_13_Bathyarchaeota_38_9_curated
translation initiation factor Sui1
13_2_20cm_2_scaffold_1292_7
unknown

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5696..5944
DNA (249bp) protein (83aa)

This feature has no annotations

13_2_20cm_2_scaffold_1292_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(5957..7018)
DNA (1062bp) protein (354aa)
Transcription initiation factor IIB n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U4W7_9ARCH rbh
transcription factor TFIIB cyclin-related protein; K03124 transcription initiation factor TFIIB Tax=RBG_13_Bathyarchaeota_38_9_curated
tfb1; transcription initiation factor IIB
13_2_20cm_2_scaffold_1292_trna_1
unknown

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7088..7223
DNA (136bp)
transferRNA
13_2_20cm_2_scaffold_1292_9
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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7810..8373
DNA (564bp) protein (188aa)
cytidyltransferase (EC:2.7.7.3) Tax=RBG_16_Bathyarchaeota_57_9_curated
phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N639_9ARCH
13_2_20cm_2_scaffold_1292_10
unknown

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comp(8400..8783)
DNA (384bp) protein (128aa)

This feature has no annotations

13_2_20cm_2_scaffold_1292_11
unknown

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comp(9026..9631)
DNA (606bp) protein (202aa)

This feature has no annotations

13_2_20cm_2_scaffold_1292_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(10238..10675)
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DN66_STAMF
Marine sediment metagenome DNA, contig: S06H3_L03387 Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_2_20cm_2_scaffold_1292_13
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(10716..10952)
DNA (237bp) protein (79aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_2_20cm_2_scaffold_1292_14

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11051..11590
DNA (540bp) protein (180aa)
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AIF13093.1}; TaxID=1456211 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_59_E10.;"
metal dependent phosphohydrolase; K07023 putative hydrolases of HD superfamily id=14428258 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Metal dependent phosphohydrolase
13_2_20cm_2_scaffold_1292_15
RBG_16_Archaea_50_20_curated, Archaea

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comp(11587..12117)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI0003727633
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_2_20cm_2_scaffold_1292_16
unknown

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comp(12183..12722)
DNA (540bp) protein (180aa)

This feature has no annotations

13_2_20cm_2_scaffold_1292_17
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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12787..14571
DNA (1785bp) protein (595aa)
DNA ligase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HLI2_ACIS0
ATP-dependent DNA ligase I Tax=RBG_13_Bathyarchaeota_38_9_curated
ATP-dependent DNA ligase I
13_2_20cm_2_scaffold_1292_18
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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14608..15285
DNA (678bp) protein (226aa)
DNA primase small subunit n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KP20_ARCVS
DNA primase small subunit Tax=RBG_16_Bathyarchaeota_48_13_curated
DNA primase small subunit
13_2_20cm_2_scaffold_1292_19
unknown

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comp(15299..15448)
DNA (150bp) protein (50aa)

This feature has no annotations

13_2_20cm_2_scaffold_1292_20
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(15533..16600)
DNA (1068bp) protein (356aa)
Aminotransferase class I and II id=2009528 bin=GWB2_Proteobacteria_55_19 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Deltaproteobacteria_55_19_curated
hypothetical protein
13_2_20cm_2_scaffold_1292_21
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(16597..17490)
DNA (894bp) protein (298aa)
agmatinase; K01480 agmatinase [EC:3.5.3.11] Tax=RBG_13_Bathyarchaeota_38_9_curated
agmatinase (EC:3.5.3.11)
Agmatinase (Agmatine ureohydrolase) n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BIW8_HYPBU
13_2_20cm_2_scaffold_1292_22
unknown

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17549..17983
DNA (435bp) protein (145aa)

This feature has no annotations

13_2_20cm_2_scaffold_1292_23
RBG_16_Archaea_50_20_curated, Archaea

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comp(17948..19009)
DNA (1062bp) protein (354aa)
DNA topoisomerase I; K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RBG_16_Archaea_50_20_curated
DNA topoisomerase 1 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=TOP1_PYRHO
DNA topoisomerase I
Displaying 24 items

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