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13_2_20cm_2_scaffold_135

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_135_1
unknown

Not on your lists

105..332
DNA (228bp) protein (76aa)

This feature has no annotations

13_2_20cm_2_scaffold_135_2
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(615..1655)
DNA (1041bp) protein (347aa)
Phosphate uptake regulator n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJW8_NITGG
phosphate uptake regulator
Phosphate uptake regulator {ECO:0000313|EMBL:AIF82125.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus N
13_2_20cm_2_scaffold_135_3
unknown

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1770..2033
DNA (264bp) protein (88aa)

This feature has no annotations

13_2_20cm_2_scaffold_135_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2154..3314
DNA (1161bp) protein (387aa)
Phosphate ABC transporter, periplasmic phosphate-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILL2_NITGG
pstC; phosphate ABC transporter substrate-binding protein
Phosphate ABC transporter, periplasmic phosphate-binding protein {ECO:0000313|EMBL:AFU60488.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae;
13_2_20cm_2_scaffold_135_5
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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3416..4426
DNA (1011bp) protein (337aa)
ABC phosphate uptake transporter, substrate-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIL0_NITGG
pstC; phosphate transport system permease protein PstC
Phosphate transport system permease protein PstC {ECO:0000313|EMBL:AJM93013.1}; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatu
13_2_20cm_2_scaffold_135_6
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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4430..5281
DNA (852bp) protein (284aa)
Phosphate transport system permease protein pstA n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQS3_9ARCH
Phosphate transport system permease protein pstA {ECO:0000313|EMBL:CDI04987.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
pstA; Phosphate transport system permease protein PstA
13_2_20cm_2_scaffold_135_7
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

5278..6108
DNA (831bp) protein (277aa)
pstB; ABC phosphate uptake transporter, ATP-binding protein (EC:3.6.3.27) Tax=RBG_16_Thaumarchaeota_49_8_curated
pstB; ABC phosphate uptake transporter, ATP-binding protein (EC:3.6.3.27)
ABC phosphate uptake transporter, ATP-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMI6_NITGG
13_2_20cm_2_scaffold_135_8
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

6136..6759
DNA (624bp) protein (208aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9B5_NITGG
phosphate uptake regulator, PhoU Tax=RBG_16_Thaumarchaeota_49_8_curated
phosphate uptake regulator, PhoU
13_2_20cm_2_scaffold_135_9
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

7278..7547
DNA (270bp) protein (90aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6) Tax=RBG_16_Bathyarchaeota_48_13_curated
DNA-directed RNA polymerase subunit H n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7DAF5_STAHD
RNA polymerase Rpb5
13_2_20cm_2_scaffold_135_10
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

7573..10920
DNA (3348bp) protein (1116aa)
rpoB; DNA-directed RNA polymerase subunit B (EC:2.7.7.6) Tax=RBG_16_Archaea_50_20_curated
rpoB; DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0ILI7_NITGG
13_2_20cm_2_scaffold_135_11
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

10923..13820
DNA (2898bp) protein (966aa)
rpoA; DNA-directed RNA polymerase subunit A (EC:2.7.7.6) Tax=RBG_16_Archaea_50_20_curated
rpoA; DNA-directed RNA polymerase subunit A (EC:2.7.7.6)
DNA-directed RNA polymerase n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IC33_NITGG
13_2_20cm_2_scaffold_135_12
RBG_16_Archaea_50_20_curated, Archaea

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13759..14622
DNA (864bp) protein (288aa)
rpoA; DNA-directed RNA polymerase subunit A (EC:2.7.7.6) Tax=RBG_16_Archaea_50_20_curated
rpoA2; DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'' n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=RPOA2_PYRAB
13_2_20cm_2_scaffold_135_13
RBG_16_Archaea_50_20_curated, Archaea

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14626..14934
DNA (309bp) protein (103aa)
50S ribosomal protein L30 n=1 Tax=Methanothermococcus thermolithotrophicus RepID=UPI0003744309
50S ribosomal protein L30e; K02908 large subunit ribosomal protein L30e Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L30e
13_2_20cm_2_scaffold_135_14
RBG_16_Archaea_50_20_curated, Archaea

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14934..15371
DNA (438bp) protein (146aa)
Probable transcription termination protein NusA n=3 Tax=Sulfolobus acidocaldarius RepID=NUSA_SULAC
transcription elongation factor NusA-like protein; K02600 N utilization substance protein A Tax=RBG_16_Archaea_50_20_curated
transcription elongation factor NusA-like protein
13_2_20cm_2_scaffold_135_15
unknown

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15698..15829
DNA (132bp) protein (44aa)

This feature has no annotations

13_2_20cm_2_scaffold_135_16
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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15984..16421
DNA (438bp) protein (146aa)
30S ribosomal protein S12 n=1 Tax=candidate division YNPFFA RepID=UPI000367D838
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=RBG_13_Bathyarchaeota_38_9_curated
rps12P; 30S ribosomal protein S12P
13_2_20cm_2_scaffold_135_17
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(18332..19366)
DNA (1035bp) protein (345aa)
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] Tax=RBG_16_Archaea_50_20_curated
gcvT; glycine cleavage system protein T (EC:2.1.2.10)
hypothetical protein n=1 Tax=Alkalibacillus haloalkaliphilus RepID=UPI0002E4987D
13_2_20cm_2_scaffold_135_18
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(19462..19644)
DNA (183bp) protein (61aa)
Tax=RBG_16_Bathyarchaeota_57_9_curated
13_2_20cm_2_scaffold_135_19
RBG_16_Archaea_50_20_curated, Archaea

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19802..20242
DNA (441bp) protein (147aa)
Tax=RBG_16_Archaea_50_20_curated
13_2_20cm_2_scaffold_135_20
unknown

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comp(20481..21218)
DNA (738bp) protein (246aa)

This feature has no annotations

13_2_20cm_2_scaffold_135_21
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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21432..21902
DNA (471bp) protein (157aa)
N-acetyltransferase GCN5 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
GCN5-related N-acetyltransferase id=1242502 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
N-acetyltransferase GCN5
13_2_20cm_2_scaffold_135_22
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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22026..23213
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0M0M3_9EURY rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB69888.1}; TaxID=261391 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon Gpl.
13_2_20cm_2_scaffold_135_23
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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23210..24781
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0LQ98_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB69887.1}; TaxID=261391 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon Gpl.
13_2_20cm_2_scaffold_135_24
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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24781..25782
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0N336_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB69886.1}; TaxID=261391 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon Gpl.
13_2_20cm_2_scaffold_135_25
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(25792..26490)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0N813_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB69885.1}; TaxID=261391 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon Gpl.
13_2_20cm_2_scaffold_135_26
uncultured crenarchaeote 57a5, Crenarchaeota, Archaea

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26767..28140
DNA (1374bp) protein (458aa)
Nitroreductase related protein n=1 Tax=uncultured crenarchaeote 57a5 RepID=D4N734_9CREN
Nitroreductase related protein {ECO:0000313|EMBL:ACY24520.1}; TaxID=684058 species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 57a5.;"
hypothetical protein
13_2_20cm_2_scaffold_135_27
RBG_16_Archaea_50_20_curated, Archaea

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comp(28401..28757)
DNA (357bp) protein (119aa)
Uncharacterized protein Tax=RBG_16_Archaea_50_20_curated
13_2_20cm_2_scaffold_135_28
unknown

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28901..29272
DNA (372bp) protein (124aa)

This feature has no annotations

13_2_20cm_2_scaffold_135_29
Mesotoga infera, Mesotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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comp(29319..29801)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Mesotoga sp. PhosAc3 RepID=N1JPH8_9THEM
Uncharacterized protein {ECO:0000313|EMBL:CCU84967.1}; TaxID=1236046 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Mesotoga.;" source="Mesotoga infera.;"
hypothetical protein
13_2_20cm_2_scaffold_135_30
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(29825..30178)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. JVH1 RepID=J2JAH8_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KJL35163.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
Displaying items 1-30 of 88 in total

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