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13_2_20cm_2_scaffold_1540

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1540_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

3..728
DNA (726bp) protein (242aa)
ABC-3 protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AU0_SOLUE
ABC-3 protein; K02075 zinc/manganese transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ABC-3 protein
13_2_20cm_2_scaffold_1540_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(775..1356)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003603D76
DinB-like domain protein
DinB-like domain protein {ECO:0000313|EMBL:AHG88849.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_1540_3
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1522..1854
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003677A74
PadR family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ACO31322.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsu
13_2_20cm_2_scaffold_1540_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

1878..4544
DNA (2667bp) protein (889aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003779EAD rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_2_20cm_2_scaffold_1540_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(4760..5566)
DNA (807bp) protein (269aa)
Xylose isomerase-like TIM barrel n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUW2_KORVE
xylose isomerase
Xylose isomerase-like TIM barrel {ECO:0000313|EMBL:ABF39338.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="
13_2_20cm_2_scaffold_1540_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(5988..6632)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037DFAE8
type 11 methyltransferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
type 11 methyltransferase
13_2_20cm_2_scaffold_1540_7
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

7099..7965
DNA (867bp) protein (289aa)
aldo/keto reductase Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
aldo/keto reductase id=4794477 bin=GWC2_Bacteroidetes_40_22 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
aldo/keto reductase
13_2_20cm_2_scaffold_1540_8
unknown

Not on your lists

comp(8081..8323)
DNA (243bp) protein (81aa)

This feature has no annotations

13_2_20cm_2_scaffold_1540_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8429..8719)
DNA (291bp) protein (97aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG38_CHLTF
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_2_20cm_2_scaffold_1540_10
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists


comp(8764..10647)
DNA (1884bp) protein (628aa)
phenylalanyl-tRNA synthetase beta subunit; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITS7_KORVE
phenylalanyl-tRNA synthetase subunit beta
13_2_20cm_2_scaffold_1540_11
unknown

Not on your lists

comp(10650..10772)
DNA (123bp) protein (41aa)

This feature has no annotations

13_2_20cm_2_scaffold_1540_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(10776..11555)
DNA (780bp) protein (260aa)
methylase id=14425357 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
methylase Tax=CSP1_2_Dadabacteria
methylase
13_2_20cm_2_scaffold_1540_13
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists


comp(11641..12774)
DNA (1134bp) protein (378aa)
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITS9_KORVE
phenylalanyl-tRNA synthetase subunit alpha
13_2_20cm_2_scaffold_1540_14
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


comp(12932..13312)
DNA (381bp) protein (127aa)
50S ribosomal protein L20 n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037A0BED
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000255|HAMAP-Rule:MF_00382}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (st
13_2_20cm_2_scaffold_1540_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists


comp(13696..13917)
DNA (222bp) protein (74aa)
50S ribosomal protein L35 n=1 Tax=uncultured candidate division JS1 bacterium RepID=G3BMT2_9BACT
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35 Tax=RBG_16_Acidobacteria_70_10_curated
rpmI; 50S ribosomal protein L35
13_2_20cm_2_scaffold_1540_16
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(13981..14496)
DNA (516bp) protein (172aa)
Translation initiation factor IF-3 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITT2_KORVE
translation initiation factor 3; K02520 translation initiation factor IF-3 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
translation initiation factor 3
13_2_20cm_2_scaffold_1540_17
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(14791..15522)
DNA (732bp) protein (244aa)
hypothetical protein id=14429016 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
Glyoxalase-like domain protein
13_2_20cm_2_scaffold_1540_18
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(15558..16214)
DNA (657bp) protein (219aa)
HhH-GPD family protein (EC:3.2.2.21); K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21] Tax=CG_Anaero_02
HhH-GPD family protein (EC:3.2.2.21)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0002E3EAE2
13_2_20cm_2_scaffold_1540_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16246..18201)
DNA (1956bp) protein (652aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
Threonine--tRNA ligase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHB5_KORVE
thrS; threonyl-tRNA synthetase
13_2_20cm_2_scaffold_1540_20
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

Not on your lists

comp(18313..18642)
DNA (330bp) protein (110aa)
Tax=RBG_16_RIF03_38_10_curated
13_2_20cm_2_scaffold_1540_21
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

19041..20435
DNA (1395bp) protein (465aa)
Putative uncharacterized protein id=3723503 bin=GWA2_Ignavibacteriae_55_25 species=Mobilicoccus pelagius genus=Mobilicoccus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Ignavibacteriae_55_25 organism_group=Ignavibacteria
hypothetical protein Tax=RBG_13_Caldithrix_44_9_curated
hypothetical protein
13_2_20cm_2_scaffold_1540_22
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(20442..20930)
DNA (489bp) protein (163aa)
short-chain dehydrogenase n=1 Tax=Marinimicrobia bacterium SCGC AAA298-D23 RepID=UPI0003A41811
short-chain dehydrogenase/reductase SDR Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
dehydrogenase
Displaying 22 items

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