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13_2_20cm_2_scaffold_1552

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1552_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3..824
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CQ85_TRURR
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_2_scaffold_1552_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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824..2773
DNA (1950bp) protein (650aa)
Peptidase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIK6_RHOMR
peptidase
Peptidase {ECO:0000313|EMBL:AEN72339.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
13_2_20cm_2_scaffold_1552_3
unknown

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comp(2811..3194)
DNA (384bp) protein (128aa)

This feature has no annotations

13_2_20cm_2_scaffold_1552_4
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(3209..5254)
DNA (2046bp) protein (682aa)
dipeptidyl aminopeptidase/acylaminoacyl-peptidase Tax=GWA2_Ignavibacteria_54_16_curated
dipeptidyl aminopeptidase/acylaminoacyl-peptidase id=24432021 bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
peptidase S9, prolyl oligopeptidase active site region
13_2_20cm_2_scaffold_1552_5
unknown

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comp(5304..5573)
DNA (270bp) protein (90aa)

This feature has no annotations

13_2_20cm_2_scaffold_1552_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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5643..6638
DNA (996bp) protein (332aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UJV3_ANASK
13_2_20cm_2_scaffold_1552_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(6642..7268)
DNA (627bp) protein (209aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_2_scaffold_1552_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(7265..8704)
DNA (1440bp) protein (480aa)
peptidase M16 domain protein
Peptidase M16 domain protein {ECO:0000313|EMBL:AHG88464.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative M16B family peptidase id=12557712 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_2_20cm_2_scaffold_1552_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(8701..10083)
DNA (1383bp) protein (461aa)
peptidase M16-like protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Peptidase M16-like protein id=3800449 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
peptidase M16-like protein
13_2_20cm_2_scaffold_1552_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10258..10410
DNA (153bp) protein (51aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_1552_11
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

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comp(10407..11336)
DNA (930bp) protein (310aa)
metal dependent phosphohydrolase Tax=RBG_16_Zixibacteria_43_9_curated
metal dependent phosphohydrolase id=24519186 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
HD domain-containing protein
13_2_20cm_2_scaffold_1552_12
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(11411..11695)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NBK7_KITSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ28588.1}; TaxID=452652 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33
13_2_20cm_2_scaffold_1552_13
Pseudomonas sp. FeS53a, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11915..12685
DNA (771bp) protein (257aa)
Regulatory components of sensory transduction system n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP74_9PROT
Two-component response regulator {ECO:0000313|EMBL:KIV73941.1}; TaxID=1604022 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomo
transcriptional regulatory protein ompR
13_2_20cm_2_scaffold_1552_14
Burkholderia sp. 2002721687, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13448..13804
DNA (357bp) protein (119aa)
Transcriptional regulatory, C terminal family protein n=3 Tax=Burkholderia thailandensis RepID=N0APD4_BURTH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY38589.1}; TaxID=1468409 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp.
13_2_20cm_2_scaffold_1552_15
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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13801..14862
DNA (1062bp) protein (354aa)
hypothetical protein Tax=RBG_16_Aminicenantes_63_16_curated
hypothetical protein id=24428421 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Pseudomonas pseudoalcaligenes genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
PBS lyase HEAT domain-containing protein repeat-containing protein
13_2_20cm_2_scaffold_1552_16
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14859..16286
DNA (1428bp) protein (476aa)
Glycosyl transferase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RP36_BLASD
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:CCG02697.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain D
13_2_20cm_2_scaffold_1552_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(16352..17599)
DNA (1248bp) protein (416aa)
dipeptidase; K01273 membrane dipeptidase [EC:3.4.13.19] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative dipeptidase (EC:3.4.13.-)
Renal dipeptidase family protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQ63_BREDI
13_2_20cm_2_scaffold_1552_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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17668..18189
DNA (522bp) protein (174aa)
(2Fe-2S)-binding domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5B6_9CHLR
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
13_2_20cm_2_scaffold_1552_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18176..18808
DNA (633bp) protein (211aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
4-hydroxybenzoyl-CoA reductase subunit alpha id=3983840 bin=GWC2_Methylomirabilis_70_24 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
13_2_20cm_2_scaffold_1552_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18754..20553
DNA (1800bp) protein (600aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
pth:PTH_1538 CoxL; aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs id=1247861 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
13_2_20cm_2_scaffold_1552_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20553..21563
DNA (1011bp) protein (337aa)
UniRef90_D6U5B8 Molybdopterin dehydrogenase FAD-binding n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5B8_9CHLR id=1247860 bin=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
13_2_20cm_2_scaffold_1552_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21571..22113)
DNA (543bp) protein (181aa)
Transcriptional regulator, PadR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYM9_RUBXD
PadR family transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcriptional regulator PadR family protein
13_2_20cm_2_scaffold_1552_23
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22314..22988
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FFL2_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95003.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
13_2_20cm_2_scaffold_1552_24
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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22985..23590
DNA (606bp) protein (202aa)
Putative two-component hybrid sensor and regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z2_GEMAT
putative two-component hybrid sensor and regulator
Putative two-component hybrid sensor and regulator {ECO:0000313|EMBL:BAH37652.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmati
Displaying 24 items

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