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13_2_20cm_2_scaffold_1593

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1593_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(1..405)
DNA (405bp) protein (135aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Aldehyde dehydrogenase (Fragment) n=2 Tax=mine drainage metagenome RepID=T1AI20_9ZZZZ
Aldehyde Dehydrogenase
13_2_20cm_2_scaffold_1593_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(435..875)
DNA (441bp) protein (147aa)
histidinol-phosphate phosphatase family protein; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] Tax=RBG_16_Euryarchaeota_67_27_curated
histidinol-phosphate phosphatase family domain/HAD-superfamily hydrolase, subfamily IIIA (EC:3.1.3.82 3.1.3.83)
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C38D5
13_2_20cm_2_scaffold_1593_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(872..1639)
DNA (768bp) protein (256aa)
histidinol-phosphate phosphatase family protein; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] Tax=RBG_16_Euryarchaeota_67_27_curated
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRJ2_9BACT
putative ADP-ribose pyrophosphatase
13_2_20cm_2_scaffold_1593_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(1725..2363)
DNA (639bp) protein (213aa)
O-methyltransferase family protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRI1_9BACT
O-methyltransferase Tax=RBG_16_Euryarchaeota_67_27_curated
O-methyltransferase
13_2_20cm_2_scaffold_1593_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2605..2949)
DNA (345bp) protein (115aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_2_20cm_2_scaffold_1593_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2962..4239
DNA (1278bp) protein (426aa)
miaB1; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase (EC:2.8.4.3)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003821D54 rbh
2-methylthioadenine synthetase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_2_20cm_2_scaffold_1593_trna_1
unknown

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4262..4334
DNA (73bp)
transferRNA
13_2_20cm_2_scaffold_1593_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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4340..4597
DNA (258bp) protein (86aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_2_20cm_2_scaffold_1593_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4530..6485)
DNA (1956bp) protein (652aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037EA70C
7-cyano-7-deazaguanine tRNA-ribosyltransferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
7-cyano-7-deazaguanine tRNA-ribosyltransferase
13_2_20cm_2_scaffold_1593_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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6580..7365
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQC2_METZD
hypothetical protein; K07502 hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_2_20cm_2_scaffold_1593_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(7362..7706)
DNA (345bp) protein (115aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
Uncharacterized protein id=4880920 bin=GWC2_Pelobacter_58_13 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
13_2_20cm_2_scaffold_1593_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(7727..8101)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035F63A8
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_2_20cm_2_scaffold_1593_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(8105..8506)
DNA (402bp) protein (134aa)
Two component transcriptional regulator, Fis family n=3 Tax=Anaeromyxobacter RepID=B4UDR6_ANASK
Fis family two component sigma-54 specific transcriptional regulator; K02667 two-component system, NtrC family, response regulator PilR Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Fis family transcriptional regulator
13_2_20cm_2_scaffold_1593_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(8599..9663)
DNA (1065bp) protein (355aa)
Multi-sensor hybrid histidine kinase n=1 Tax=mine drainage metagenome RepID=T1A238_9ZZZZ
two component sigma54 specific Fis family transcriptional regulator Tax=RBG_16_Euryarchaeota_67_27_curated
Fis family transcriptional regulator
13_2_20cm_2_scaffold_1593_14
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(9641..12436)
DNA (2796bp) protein (932aa)
Two-component hybrid sensor and regulator n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QCL2_9DELT
multi-sensor hybrid histidine kinase Tax=RBG_16_Spirochaete_67_19_curated
multi-sensor hybrid histidine kinase
13_2_20cm_2_scaffold_1593_15
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(12590..13282)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000380433D
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_16_Euryarchaeota_68_13_curated
circadian clock protein, KaiC
13_2_20cm_2_scaffold_1593_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

13417..14034
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5ICL4_ACIB4
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_2_20cm_2_scaffold_1593_17
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

14047..14400
DNA (354bp) protein (118aa)
peptidyl-tRNA hydrolase; K04794 peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] Tax=RBG_16_Euryarchaeota_68_13_curated
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=2 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=PTH_PYRAB
13_2_20cm_2_scaffold_1593_18
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

14403..14975
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037C5D1A
hypothetical protein; K09120 hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_2_20cm_2_scaffold_1593_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(14998..15537)
DNA (540bp) protein (180aa)
Protein pelota homolog n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7R6_9EURY
putative cell division protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative cell division protein
13_2_20cm_2_scaffold_1593_20
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(15617..15886)
DNA (270bp) protein (90aa)
Protein pelota homolog n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7R6_9EURY
Suspect SCG annotation. See neighboring gene [13_2_20cm_2_scaffold_1593_19].
putative cell division protein Tax=RBG_16_Euryarchaeota_68_13_curated
putative cell division protein
13_2_20cm_2_scaffold_1593_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(15952..16284)
DNA (333bp) protein (111aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_2_20cm_2_scaffold_1593_22
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(16448..17680)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036DC8F0
translation initiation factor IF-2 subunit gamma Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
protein synthesis factor GTP-binding protein
13_2_20cm_2_scaffold_1593_23
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(17677..18066)
DNA (390bp) protein (130aa)
30S ribosomal protein S6e n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HK77_ACIS0
ribosomal protein S6E (S10) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ribosomal protein S6E (S10)
13_2_20cm_2_scaffold_1593_24
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(18203..18355)
DNA (153bp) protein (51aa)
cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 25 items

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