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13_2_20cm_2_scaffold_163

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_163_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(1..282)
DNA (282bp) protein (94aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB87_GEMAT
IMP dehydrogenase
13_2_20cm_2_scaffold_163_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(291..626)
DNA (336bp) protein (112aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=GWC2_Gemmatimonadetes_71_10_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB89_GEMAT
hypothetical protein
13_2_20cm_2_scaffold_163_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(623..1645)
DNA (1023bp) protein (341aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_2_scaffold_163_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

1656..3212
DNA (1557bp) protein (519aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB94_GEMAT
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosp
13_2_20cm_2_scaffold_163_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3213..3953
DNA (741bp) protein (247aa)
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_163_6
RBG_16_OP11_Levybacteria_35_6_curated, Levybacteria, Microgenomates, Bacteria

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3941..4636
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000381E338
binding-protein-dependent transport system inner membrane protein; K05773 tungstate transport system permease protein Tax=RBG_16_OP11_Levybacteria_35_6_curated
binding-protein-dependent transport systems inner membrane component
13_2_20cm_2_scaffold_163_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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4629..5630
DNA (1002bp) protein (334aa)
ABC transporter; K06857 tungstate transport system ATP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC transporter ATP-binding protein; K06857 tungstate transport system ATP-binding protein id=14430717 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Tungsten transporter ATP binding protein
13_2_20cm_2_scaffold_163_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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5633..6052
DNA (420bp) protein (140aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=GWC2_Gemmatimonadetes_71_10_curated
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NSV1_9SPHI
6-pyruvoyl tetrahydrobiopterin synthase
13_2_20cm_2_scaffold_163_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6174..6893
DNA (720bp) protein (240aa)
formate dehydrogenase family accessory protein (FdhD) Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative formate dehydrogenase family accessory protein (FdhD) id=3910770 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
formate dehydrogenase family accessory protein FdhD
13_2_20cm_2_scaffold_163_10

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6890..7297
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003713DB1
Marine sediment metagenome DNA, contig: S01H1_S29705 {ECO:0000313|EMBL:GAG36608.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
NAD(P)-binding protein
13_2_20cm_2_scaffold_163_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7302..7901
DNA (600bp) protein (200aa)
molybdopterin-guanine dinucleotide biosynthesis protein A; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Molybdopterin-guanine dinucleotide biosynthesis protein A
Molybdenum cofactor guanylyltransferase id=4621961 bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_2_scaffold_163_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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7898..8416
DNA (519bp) protein (173aa)
Molybdopterin guanine dinucleotide biosynthesis accessory protein MobB n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RHH0_MOOTA
molybdopterin-guanine dinucleotide biosynthesis protein B; K03753 molybdopterin-guanine dinucleotide biosynthesis protein B Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
molybdopterin-guanine dinucleotide biosynthesis protein B
13_2_20cm_2_scaffold_163_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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8418..9671
DNA (1254bp) protein (418aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] Tax=GWC2_Gemmatimonadetes_71_10_curated
MoeA domain protein domain I and II
Molybdopterin molybdochelatase id=4324808 bin=GWF2_Syntrophobacterales_56_9 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
13_2_20cm_2_scaffold_163_14
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

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9672..10499
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI00036D7D8F
diguanylate cyclase Tax=GWC2_Nitrospirae_56_14_curated
diguanylate cyclase
13_2_20cm_2_scaffold_163_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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10504..11130
DNA (627bp) protein (209aa)
Multiple antibiotic resistance MarC-related protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU42_KORVE
multiple antibiotic resistance MarC-like protein
UPF0056 inner membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatil
13_2_20cm_2_scaffold_163_16
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(11127..11810)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6E7_9BACT id=5223510 bin=16ft_combo_ws3_JS1 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
diguanylate cyclase Tax=RBG_16_Chloroflexi_63_12_curated
diguanylate cyclase
13_2_20cm_2_scaffold_163_17
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

comp(11943..13595)
DNA (1653bp) protein (551aa)
electron-transferring-flavoprotein dehydrogenase; K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] id=1250187 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
electron-transferring-flavoprotein dehydrogenase; K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
electron-transferring-flavoproteindehydrogenase (EC:1.5.5.1)
13_2_20cm_2_scaffold_163_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13716..14696)
DNA (981bp) protein (327aa)
etfA; electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit Tax=GWC2_Gemmatimonadetes_71_10_curated
Electron transfer flavoprotein alpha/beta-subunit
electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit id=24469728 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
13_2_20cm_2_scaffold_163_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(14693..15445)
DNA (753bp) protein (251aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABA3_GEMAT
etfB; electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
etfB; electron transfer flavoprotein subunit beta
13_2_20cm_2_scaffold_163_20
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(15494..17659)
DNA (2166bp) protein (722aa)
Putative TonB-dependent siderophore receptor n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHT6_9BACT
TonB-dependent siderophore receptor
Putative TonB-dependent siderophore receptor {ECO:0000313|EMBL:CBE67219.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis
13_2_20cm_2_scaffold_163_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(17709..18896)
DNA (1188bp) protein (396aa)
gcdH; glutaryl-CoA dehydrogenase (EC:1.3.99.7); K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Glutaryl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABA7_GEMAT
acyl-CoA dehydrogenase domain-containing protein
13_2_20cm_2_scaffold_163_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(18938..19789)
DNA (852bp) protein (284aa)
Metallophosphoesterase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZR5_RUBXD
metallophosphoesterase Tax=RBG_16_Gemmatimonadetes_66_8_curated
metallophosphoesterase
13_2_20cm_2_scaffold_163_23
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19786..21207)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HJ83_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKV30453.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirill
hypothetical protein
13_2_20cm_2_scaffold_163_24
unknown

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comp(21183..21326)
DNA (144bp) protein (48aa)

This feature has no annotations

13_2_20cm_2_scaffold_163_25
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21475..22488)
DNA (1014bp) protein (338aa)
Isocitrate dehydrogenase {ECO:0000313|EMBL:KJC42192.1}; EC=1.1.1.41 {ECO:0000313|EMBL:KJC42192.1};; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae
Isocitrate dehydrogenase (NAD(+)) n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U960_METS4
isocitrate dehydrogenase (NAD(+))
13_2_20cm_2_scaffold_163_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(22485..23231)
DNA (747bp) protein (249aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_2_scaffold_163_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(23228..24118)
DNA (891bp) protein (297aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100) Tax=RBG_16_Gemmatimonadetes_66_8_curated
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=uncultured bacterium RepID=Q565X5_9BACT
fabG; 3-ketoacyl-ACP reductase
13_2_20cm_2_scaffold_163_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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24147..24791
DNA (645bp) protein (215aa)
carbon starvation protein A n=1 Tax=Brevibacillus laterosporus RepID=UPI00037C7C5A
cstA; carbon starvation protein A; K06200 carbon starvation protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
carbon starvation protein CstA
13_2_20cm_2_scaffold_163_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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24788..26050
DNA (1263bp) protein (421aa)
Carbon starvation protein CstA n=1 Tax=Desmospora sp. 8437 RepID=F5SAM8_9BACL
carbon starvation protein CstA; K06200 carbon starvation protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
carbon starvation protein CstA
13_2_20cm_2_scaffold_163_30
unknown

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26034..26255
DNA (222bp) protein (74aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

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