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13_2_20cm_2_scaffold_1940

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1940_1
unknown

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comp(1..69)
DNA (69bp) protein (23aa)

This feature has no annotations

13_2_20cm_2_scaffold_1940_2
CSP1_5_NC10, NC10, Bacteria

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comp(270..1247)
DNA (978bp) protein (326aa)
beta-ribofuranosylaminobenzene 5'-phosphate synthase. Involved in methanopterin biosynthesis (orf4) id=14429011 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
beta-ribofuranosylaminobenzene 5'-phosphate synthase. Involved in methanopterin biosynthesis (orf4) Tax=CSP1_5_NC10
beta-ribofuranosylaminobenzene 5'-phosphate synthase. Involved in methanopterin biosynthesis (orf4)
13_2_20cm_2_scaffold_1940_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(1244..1816)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJW4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67547.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_2_20cm_2_scaffold_1940_4
R_NC10_66_22, NC10, Bacteria

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comp(1813..2448)
DNA (636bp) protein (212aa)
trpG; anthranilate synthase, component II (EC:4.1.3.27); K01658 anthranilate synthase component II [EC:4.1.3.27] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
trpG; anthranilate synthase component II (EC:4.1.3.27)
Glutamine amidotransferase of anthranilate synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVB1_9BACT
13_2_20cm_2_scaffold_1940_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(2460..2915)
DNA (456bp) protein (152aa)
Competence protein ComEA helix-hairpin-helix repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NQ1_SOLUE
helix-hairpin-helix repeat-containing competence protein ComEA
Competence protein ComEA helix-hairpin-helix repeat protein {ECO:0000313|EMBL:ABJ88719.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacterace
13_2_20cm_2_scaffold_1940_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(2917..4434)
DNA (1518bp) protein (506aa)
Pyrrolo-quinoline quinone n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NQ2_SOLUE
pyrrolo-quinoline quinone
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ABJ88718.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" sourc
13_2_20cm_2_scaffold_1940_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(4431..6650)
DNA (2220bp) protein (740aa)
Pyrrolo-quinoline quinone n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NQ4_SOLUE
pyrrolo-quinoline quinone
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ABJ88716.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" sourc
13_2_20cm_2_scaffold_1940_8
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

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comp(6647..8113)
DNA (1467bp) protein (489aa)
pabB; para-aminobenzoate synthase component 1 (EC:2.6.1.85) Tax=RBG_16_Chloroflexi_56_11_curated
para-aminobenzoate synthase subunit I (EC:4.1.3.27)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E6109E rbh
13_2_20cm_2_scaffold_1940_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(8110..9552)
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJW5_9BACT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67548.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_2_20cm_2_scaffold_1940_10
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9800..10627)
DNA (828bp) protein (276aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0X2_NITHN
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADE14529.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitros
13_2_20cm_2_scaffold_1940_11
unknown

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10689..10787
DNA (99bp) protein (33aa)

This feature has no annotations

13_2_20cm_2_scaffold_1940_12
GWC2_Elusimicrobia_64_44_curated, Elusimicrobia, Bacteria

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10796..11380
DNA (585bp) protein (195aa)
UPF0264 protein CV_3961 id=4800521 bin=GWC2_Elusimicrobia_64_44 species=Chromobacterium violaceum genus=Chromobacterium taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein Tax=GWC2_Elusimicrobia_64_44_curated
hypothetical protein
13_2_20cm_2_scaffold_1940_13
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(11252..11875)
DNA (624bp) protein (208aa)
Delta 1-pyrroline-5-carboxylate synthetase id=14429018 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Delta 1-pyrroline-5-carboxylate synthetase Tax=CSP1_5_NC10
aspartate/glutamate/uridylate kinase
13_2_20cm_2_scaffold_1940_14

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comp(11872..12876)
DNA (1005bp) protein (335aa)
Conserved protein Orf9 n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIS5_9BACT
Conserved protein Orf9 {ECO:0000313|EMBL:AAY96686.1}; TaxID=333425 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-4.;"
tetrahydromethanopterin biosynthesis protein
13_2_20cm_2_scaffold_1940_15

Not on your lists

12882..13634
DNA (753bp) protein (251aa)
Orf17 n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN2_9BACT
Orf17 {ECO:0000313|EMBL:AAY89282.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
hisA/hisF family protein
13_2_20cm_2_scaffold_1940_16
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(13613..14116)
DNA (504bp) protein (168aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Putative 6-pyruvoyl tetrahydropterin synthase n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIS7_9BACT
6-pyruvoyl-tetrahydropterin synthase
13_2_20cm_2_scaffold_1940_17

Not on your lists

comp(14103..14975)
DNA (873bp) protein (291aa)
Triphosphoribosyl-dephospho-CoA synthase {ECO:0000256|SAAS:SAAS00100821}; EC=2.4.2.52 {ECO:0000256|SAAS:SAAS00100821};; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bact
Orf7 n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN3_9BACT
Triphosphoribosyl-dephospho-CoA synthetase
13_2_20cm_2_scaffold_1940_18

Not on your lists

comp(14972..15856)
DNA (885bp) protein (295aa)
Orf5 n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN4_9BACT
Orf5 {ECO:0000313|EMBL:AAY89280.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
alpha-L-glutamate ligase
13_2_20cm_2_scaffold_1940_19

Not on your lists

comp(16216..17199)
DNA (984bp) protein (328aa)
Methenyltetrahydromethanopterin cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00486}; EC=3.5.4.27 {ECO:0000256|HAMAP-Rule:MF_00486};; Methenyl-H4MPT cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00486}; TaxID
mch; methenyltetrahydromethanopterin cyclohydrolase (Methenyl-H4MPT cyclohydrolase) (mch) (EC:3.5.4.27)
Methylene tetrahydromethanopterin cyclohydrolase n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN5_9BACT
13_2_20cm_2_scaffold_1940_20
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17184..17948)
DNA (765bp) protein (255aa)
fhcC; formyltransferase/hydrolase complex subunit gamma (fhcC) (EC:1.2.99.5) Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
Putative GXGXG motif protein n=1 Tax=uncultured marine microorganism HF4000_APKG8K5 RepID=B3TB63_9ZZZZ
formylmethanofuran dehydrogenase subunit C
13_2_20cm_2_scaffold_1940_21

Not on your lists

comp(17945..18835)
DNA (891bp) protein (297aa)
formylmethanofuran--tetrahydromethanopterin formyltransferase (EC:2.3.1.101)
Formyltransferase/hydrolase complex subunit D (Fragment) n=1 Tax=uncultured bacterium RepID=Q52UU7_9BACT
Formyltransferase/hydrolase complex subunit D {ECO:0000313|EMBL:AAX93743.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_2_20cm_2_scaffold_1940_22
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18832..20496)
DNA (1665bp) protein (555aa)
endonuclease n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C45AF
fhcA; formyltransferase/hydrolase complex subunit alpha (fhcA) Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
formylmethanofuran dehydrogenase subunit A
13_2_20cm_2_scaffold_1940_23
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20493..21737)
DNA (1245bp) protein (415aa)
formylmethanofuran dehydrogenase subunit B (EC:1.2.99.5) Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
Formylmethanofuran dehydrogenase subunit B n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9T2_SINAD
formylmethanofuran dehydrogenase subunit B
13_2_20cm_2_scaffold_1940_24

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comp(21734..22891)
DNA (1158bp) protein (386aa)
OrfY n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIP8_9BACT
OrfY {ECO:0000313|EMBL:AAY89266.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
hypothetical protein
13_2_20cm_2_scaffold_1940_25

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comp(22888..23973)
DNA (1086bp) protein (362aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIP9_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY89265.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
hypothetical protein
13_2_20cm_2_scaffold_1940_26

Not on your lists

comp(23978..24094)
DNA (117bp) protein (39aa)
NADP-linked methylene tetrahydromethanopterin dehydrogenase {ECO:0000313|EMBL:AAY89264.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
Displaying 26 items

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