ggKbase home page

13_2_20cm_2_scaffold_2099

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_2099_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..1781)
DNA (1779bp) protein (593aa)
universal stress protein UspA n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4FCA4
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_2_scaffold_2099_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1883..2146)
DNA (264bp) protein (88aa)
fer; putative ferredoxin; K05337 ferredoxin Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_2_scaffold_2099_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2143..2592)
DNA (450bp) protein (150aa)
hypothetical protein id=14627168 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
13_2_20cm_2_scaffold_2099_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(2589..3359)
DNA (771bp) protein (257aa)
chromosome partitioning ATPase; K03593 ATP-binding protein involved in chromosome partitioning id=14626562 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
chromosome partitioning ATPase; K03593 ATP-binding protein involved in chromosome partitioning Tax=CSP1_6_Rokubacteria
mrp; putative ATPase
13_2_20cm_2_scaffold_2099_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3451..3945
DNA (495bp) protein (165aa)
Transcription elongation factor GreA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM5_GEMAT
transcription elongation factor GreA/GreB domain-containing protein
Transcription elongation factor GreA/GreB domain-containing protein {ECO:0000313|EMBL:AHG87594.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_2099_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

4025..4702
DNA (678bp) protein (226aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
13_2_20cm_2_scaffold_2099_7
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

4699..5388
DNA (690bp) protein (230aa)
methyltransferase type 11 id=14632043 bin=bin9_gal15 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
methyltransferase type 11 Tax=CSP1_3_Armatimonadetes
13_2_20cm_2_scaffold_2099_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5333..6565)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C587F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63411.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
13_2_20cm_2_scaffold_2099_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6562..7725)
DNA (1164bp) protein (388aa)
biotin carboxylase-like Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Biotin carboxylase-like protein id=4290030 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_2_20cm_2_scaffold_2099_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(7806..8414)
DNA (609bp) protein (203aa)
Nitrogen fixation protein NifU n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPR6_9BACT
thioredoxin-like protein; K07400 Fe/S biogenesis protein NfuA Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
thioredoxin-like protein
13_2_20cm_2_scaffold_2099_11
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8475..10742)
DNA (2268bp) protein (756aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:S
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E96A52
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
13_2_20cm_2_scaffold_2099_12
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

10951..11481
DNA (531bp) protein (177aa)
Tax=BJP_IG2158_Zixibacteria_48_33
13_2_20cm_2_scaffold_2099_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

11481..12197
DNA (717bp) protein (239aa)
Peptidase S7, flavivirus helicase (NS3) n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020I8_SOLUE
peptidase S7
Peptidase S7, flavivirus helicase (NS3) {ECO:0000313|EMBL:ABJ84665.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="So
13_2_20cm_2_scaffold_2099_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12194..13468
DNA (1275bp) protein (425aa)
Peptidase M36, fungalysin n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023Z1_SOLUE
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase M36, fungalysin
13_2_20cm_2_scaffold_2099_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13408..14334
DNA (927bp) protein (309aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_2099_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14331..14990
DNA (660bp) protein (220aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_2099_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14991..15638)
DNA (648bp) protein (216aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_2_scaffold_2099_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15641..16195)
DNA (555bp) protein (185aa)
putative glycosyl hydrolase, family 13 (EC:2.4.1.-)
Putative Glycosyl hydrolase, family 13 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDN4_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_2_scaffold_2099_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16192..16767)
DNA (576bp) protein (192aa)
RNA polymerase n=1 Tax=Paenibacillus elgii RepID=UPI000248DF4F
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Gemmatimonadetes_71_10_curated
RNA polymerase sigma factor, sigma-70 family
13_2_20cm_2_scaffold_2099_20
unknown

Not on your lists

16834..17148
DNA (315bp) protein (105aa)

This feature has no annotations

13_2_20cm_2_scaffold_2099_21
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

17150..17458
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI00037E723D
secreted salivary gland peptide, putative Tax=CSP1_6_Rokubacteria
13_2_20cm_2_scaffold_2099_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

17495..18580
DNA (1086bp) protein (362aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative uncharacterized protein id=2085018 bin=GWB2_Bacteroidetes_32_14 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
13_2_20cm_2_scaffold_2099_23
RLO_PLX_64_10, Bacteria

Not on your lists

18667..19146
DNA (480bp) protein (160aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
id=3479344 bin=GWC1_Spirochaetes_27_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
13_2_20cm_2_scaffold_2099_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19272..21950
DNA (2679bp) protein (893aa)
TonB-dependent receptor n=1 Tax=uncultured bacterium W5-51b RepID=H9BX72_9BACT rbh
TonB-dependent receptor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
TonB-dependent receptor
13_2_20cm_2_scaffold_2099_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(22020..23912)
DNA (1893bp) protein (631aa)
ligand-gated channel n=1 Tax=Salisaeta longa RepID=UPI0003B4BA4A
bfeA; ferric enterobactin receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
bfeA; ferric enterobactin receptor
Displaying 25 items

View Taxonomy