ggKbase home page

13_2_20cm_2_scaffold_2161

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_2161_1
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(114..401)
DNA (288bp) protein (96aa)
Cro/Cl family transcriptional regulator n=5 Tax=Mycobacterium avium RepID=V7KAX0_MYCPC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAS05280.1}; TaxID=262316 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="
13_2_20cm_2_scaffold_2161_2
Mycobacterium gilvum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(804..998)
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Mycobacterium RepID=E6TPV0_MYCSR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU01873.1}; TaxID=278137 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain Spyr1).;"
13_2_20cm_2_scaffold_2161_3
unknown

Not on your lists

comp(1573..2100)
DNA (528bp) protein (176aa)

This feature has no annotations

13_2_20cm_2_scaffold_2161_4
Streptomyces sp. SM8, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2218..3414)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. SM8 RepID=K1UVV6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EKC92685.1}; TaxID=1195457 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. SM8.;"
hypothetical protein
13_2_20cm_2_scaffold_2161_5
unknown

Not on your lists

3467..3760
DNA (294bp) protein (98aa)

This feature has no annotations

13_2_20cm_2_scaffold_2161_6
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3633..5330)
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AQW1_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ86508.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum
13_2_20cm_2_scaffold_2161_7
Streptomyces sp. F2, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5349..7475)
DNA (2127bp) protein (709aa)
UPI0003D87C4B related cluster n=1 Tax=unknown RepID=UPI0003D87C4B
Transposase {ECO:0000313|EMBL:AHE39564.1}; TaxID=317660 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. F2.;"
hypothetical protein
13_2_20cm_2_scaffold_2161_8
Streptomyces sp. F12, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7472..7807)
DNA (336bp) protein (112aa)
UPI0003D89B03 related cluster n=1 Tax=unknown RepID=UPI0003D89B03
Uncharacterized protein {ECO:0000313|EMBL:AHE40262.1}; TaxID=1436084 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. F12.;"
hypothetical protein
13_2_20cm_2_scaffold_2161_9
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8725..9051
DNA (327bp) protein (109aa)
Helix-turn-helix domain protein n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AX99_FRADG
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEH08451.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
13_2_20cm_2_scaffold_2161_10
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9216..10847
DNA (1632bp) protein (544aa)
Integrase catalytic region n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK77_PSEUX rbh
Transposase {ECO:0000313|EMBL:KDA41645.1}; TaxID=683305 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
integrase catalytic subunit rbh
13_2_20cm_2_scaffold_2161_11
unknown

Not on your lists

10849..11040
DNA (192bp) protein (64aa)

This feature has no annotations

13_2_20cm_2_scaffold_2161_12
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11046..11822
DNA (777bp) protein (259aa)
IstB domain-containing protein ATP-binding protein n=1 Tax=Streptomyces zinciresistens K42 RepID=G2GBB5_9ACTO
IstB domain-containing protein ATP-binding protein {ECO:0000313|EMBL:EGX59211.1}; TaxID=700597 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomy
IstB domain-containing protein ATP-binding protein
13_2_20cm_2_scaffold_2161_13
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11903..12199
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNS335 RepID=UPI00036E5C69
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEH08451.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
13_2_20cm_2_scaffold_2161_14
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12196..12537
DNA (342bp) protein (114aa)
CutA1 divalent ion tolerance protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SAP7_GEOOG
CutA1 divalent ion tolerance protein
CutA1 divalent ion tolerance protein {ECO:0000313|EMBL:ADB73976.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilu
13_2_20cm_2_scaffold_2161_15
RBG_13_OD1_48_8_curated, Parcubacteria, Bacteria

Not on your lists

12534..13115
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PXW1_KRIFD
hypothetical protein Tax=RBG_13_OD1_48_8_curated
hypothetical protein
13_2_20cm_2_scaffold_2161_16
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13075..14628)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z3E9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM65205.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
putative Zn peptidase
13_2_20cm_2_scaffold_2161_17
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15583..17145)
DNA (1563bp) protein (521aa)
ISmav2-like transposase n=1 Tax=Streptomyces coelicoflavus ZG0656 RepID=H1Q9I5_9ACTO rbh
ISmav2-like transposase {ECO:0000313|EMBL:EHN78902.1}; TaxID=1120227 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;
integrase
13_2_20cm_2_scaffold_2161_18
unknown

Not on your lists

17194..17409
DNA (216bp) protein (72aa)

This feature has no annotations

13_2_20cm_2_scaffold_2161_19
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17406..17936
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Streptomyces sp. ATexAB-D23 RepID=UPI00035C88B5
Uncharacterized protein {ECO:0000313|EMBL:EKX65305.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
ATP/GTP-binding protein
13_2_20cm_2_scaffold_2161_20
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18043..19227
DNA (1185bp) protein (395aa)
integrase n=1 Tax=Streptomyces acidiscabies RepID=UPI00028971F9 rbh
Integrase family protein {ECO:0000313|EMBL:EFC79694.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
13_2_20cm_2_scaffold_2161_21
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19224..21308
DNA (2085bp) protein (695aa)
Integrase family protein n=1 Tax=Frankia sp. EUN1f RepID=D3DBL2_9ACTO rbh
Integrase family protein {ECO:0000313|EMBL:EFC79693.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
13_2_20cm_2_scaffold_2161_22
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21438..22559
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI0003606D36 rbh
Integrase {ECO:0000313|EMBL:KIZ19807.1}; TaxID=1240678 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.;"
integrase family protein
13_2_20cm_2_scaffold_2161_23
Streptomyces leeuwenhoekii, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22560..22892
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI000368D28A
Uncharacterized protein {ECO:0000313|EMBL:CQR59605.1}; TaxID=1437453 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces leeuwenhoekii.;"
hypothetical protein
13_2_20cm_2_scaffold_2161_24
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22896..24650
DNA (1755bp) protein (585aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI000379DA47
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE39398.1}; TaxID=40318 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
Displaying 24 items

View Taxonomy