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13_2_20cm_2_scaffold_226

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_226_1
Prevotella intermedia, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..203)
DNA (201bp) protein (67aa)
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:AFJ07913.1}; TaxID=246198 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella intermedi
13_2_20cm_2_scaffold_226_2
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(175..1515)
DNA (1341bp) protein (447aa)
aminotransferase (EC:2.6.1.-)
aminotransferase class-III Tax=CG_Ignavi_01
Aminotransferase id=3804648 bin=GWA2_Elusimicrobia_66_18 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum rbh
13_2_20cm_2_scaffold_226_3
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

comp(1512..2357)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZR12_MELRP
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
13_2_20cm_2_scaffold_226_4
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2384..3118)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:279 RepID=R7HPQ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE40928.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotel
nucleoside-diphosphate-sugar pyrophosphorylase
13_2_20cm_2_scaffold_226_5
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3096..3719)
DNA (624bp) protein (208aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
Putative HAD-superfamily hydrolase, subfamily IA, variant 3 id=4870510 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
HAD-superfamily hydrolase, subfamily IA, variant 3
13_2_20cm_2_scaffold_226_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3775..4875)
DNA (1101bp) protein (367aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_226_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4922..5785)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A779_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_2_scaffold_226_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5799..6371)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-G21 RepID=UPI00037E1F9A
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_2_scaffold_226_9
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(6368..6826)
DNA (459bp) protein (153aa)
Tax=BJP_IG2069_Spirochaetales_48_31
13_2_20cm_2_scaffold_226_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6883..8772)
DNA (1890bp) protein (630aa)
tow domain-containing protein (EC:3.6.-.-)
6-hydroxy-D-nicotine oxidase n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00037228B3
transcriptional activator domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_226_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

8835..11534
DNA (2700bp) protein (900aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Q9_GEMAT
serine/threonine protein kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
protein kinase
13_2_20cm_2_scaffold_226_12
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11546..12706)
DNA (1161bp) protein (387aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IMH2_ANADE
Endonuclease/Exonuclease/phosphatase family protein {ECO:0000313|EMBL:GAO03361.1}; Flags: Precursor;; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterine
endonuclease/exonuclease/phosphatase
13_2_20cm_2_scaffold_226_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12763..14640)
DNA (1878bp) protein (626aa)
Transcriptional activator domain n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1B2_ROSS1
transcriptional activator domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcriptional activator domain-containing protein
13_2_20cm_2_scaffold_226_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14637..17438)
DNA (2802bp) protein (934aa)
probable serine/threonine protein kinase, partial n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A67
protein kinase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_226_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17513..17995)
DNA (483bp) protein (161aa)
Blue-copper protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M3_GEMAT
blue-copper protein Tax=GWC2_Gemmatimonadetes_71_10_curated
blue-copper protein
13_2_20cm_2_scaffold_226_16
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18095..19282
DNA (1188bp) protein (396aa)
Beta-lactamase domain-containing protein n=1 Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9E439_9BACL
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:EJY55721.1}; TaxID=1200346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacil
rhodanese-like protein
13_2_20cm_2_scaffold_226_17
unknown

Not on your lists

comp(19351..19686)
DNA (336bp) protein (112aa)

This feature has no annotations

13_2_20cm_2_scaffold_226_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

19824..20897
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I866_CALAS
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_2_scaffold_226_19
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

20899..21993
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3U4_ANATU
hypothetical protein; K07114 uncharacterized protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
hypothetical protein
13_2_20cm_2_scaffold_226_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21945..22271
DNA (327bp) protein (109aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC64_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase ECF-type sigma factor
13_2_20cm_2_scaffold_226_21
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

22255..23325
DNA (1071bp) protein (357aa)
hypothetical protein Tax=RBG_16_Armatimonadetes_67_12_curated
13_2_20cm_2_scaffold_226_22
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(23326..23706)
DNA (381bp) protein (127aa)
plastocyanin Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
plastocyanin
13_2_20cm_2_scaffold_226_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23817..25028)
DNA (1212bp) protein (404aa)
molybdopterin oxidoreductase n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625782 id=5224904 bin=16ft_combo_ws3_JS1 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
mopC; protein MopC Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_2_scaffold_226_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25025..25573)
DNA (549bp) protein (183aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC-type Fe3+ transport system protein id=4799581 bin=GWC2_Ignavibacteria_56_12 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
putative cytochrome c subfamily
13_2_20cm_2_scaffold_226_25
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(25566..26111)
DNA (546bp) protein (182aa)
hypothetical membrane protein id=14626219 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
hypothetical membrane protein Tax=CSP1_6_Rokubacteria
Protein of unknown function DUF3341
13_2_20cm_2_scaffold_226_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(26108..27451)
DNA (1344bp) protein (448aa)
hypothetical protein; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] id=14426358 bin=bin1_lowGC species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin1_lowGC organism_group=Unknown_CP rbh
hypothetical protein
Displaying 26 items

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