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13_2_20cm_2_scaffold_2368

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_2368_1
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(489..974)
DNA (486bp) protein (162aa)
Probable glutathione S-transferase-related transmembrane protein n=1 Tax=Rhodococcus sp. EsD8 RepID=N1MBP1_9NOCA
hypothetical protein Tax=RBG_16_Actinobacteria_68_21_curated
polyketide cyclase
13_2_20cm_2_scaffold_2368_2
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(971..1171)
DNA (201bp) protein (67aa)
Regulatory protein ArsR n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F7ZZX5_CELGA
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:AEI11394.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 /
13_2_20cm_2_scaffold_2368_3
Arthrobacter globiformis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1416..2051
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Arthrobacter globiformis NBRC 12137 RepID=H0QMS6_ARTGO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB14127.1}; TaxID=1077972 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter globiformis NBRC 12
dihydrofolate reductase
13_2_20cm_2_scaffold_2368_4
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2139..2720
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI00036B96F1 rbh
Deaminase/reductase {ECO:0000313|EMBL:KHL01323.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
riboflavin biosynthesis protein RibD domain-containing protein
13_2_20cm_2_scaffold_2368_5
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2828..3265
DNA (438bp) protein (146aa)
glyoxalase n=1 Tax=Streptomyces canus RepID=UPI00036E441C
Glyoxalase {ECO:0000313|EMBL:KIH99683.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
hypothetical protein
13_2_20cm_2_scaffold_2368_6
unknown

Not on your lists

3343..4983
DNA (1641bp) protein (547aa)

This feature has no annotations

13_2_20cm_2_scaffold_2368_7
unknown

Not on your lists

5913..6386
DNA (474bp) protein (158aa)

This feature has no annotations

13_2_20cm_2_scaffold_2368_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6729..7928)
DNA (1200bp) protein (400aa)
L-carnitine dehydratase/bile acid-inducible protein F Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
L-carnitine dehydratase/bile acid-inducible protein F id=4935482 bin=GWC2_Methylomirabilis_70_24 species=Burkholderia sp. genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
L-carnitine dehydratase/bile acid-inducible protein F
13_2_20cm_2_scaffold_2368_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7925..8383)
DNA (459bp) protein (153aa)
MaoC-like dehydratase (EC:2.3.1.19)
MaoC-like dehydratase id=2213477 bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl dehydratase MaoC Tax=GWA2_Rokubacteria_73_35_curated
13_2_20cm_2_scaffold_2368_10
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8370..9119)
DNA (750bp) protein (250aa)
short-chain dehydrogenase/reductase SDR id=12556859 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dehydrogenase
Dehydrogenase {ECO:0000313|EMBL:ACG78964.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucine
13_2_20cm_2_scaffold_2368_11
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9124..9522)
DNA (399bp) protein (133aa)
Methylmalonyl-CoA epimerase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XU42_9BACT
methylmalonyl-CoA epimerase
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:AJF07739.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkali
13_2_20cm_2_scaffold_2368_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9657..10436
DNA (780bp) protein (260aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEA24659.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEA24659.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardia
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CX28_PSEUX
13_2_20cm_2_scaffold_2368_13
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11013..11840)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YT66_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD52205.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
hypothetical protein
13_2_20cm_2_scaffold_2368_14
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11837..12127)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI0003478EDE
Putative alkylhydroperoxidase {ECO:0000313|EMBL:GAN50459.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylo
13_2_20cm_2_scaffold_2368_15
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(12251..13219)
DNA (969bp) protein (323aa)
Amidohydrolase family n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0M4_THERP
amidohydrolase family protein
Amidohydrolase family {ECO:0000313|EMBL:ACM06234.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC
13_2_20cm_2_scaffold_2368_16
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(13240..13713)
DNA (474bp) protein (158aa)
Aldehyde oxidase small subunit n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYN1_THERP
aldehyde oxidase small subunit
Aldehyde oxidase small subunit {ECO:0000313|EMBL:ACM04714.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (str
13_2_20cm_2_scaffold_2368_17
Arthrobacter nitrophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13713..14588)
DNA (876bp) protein (292aa)
Ketone dehydrogenase medium subunit n=1 Tax=Arthrobacter sp. SJCon RepID=L8TT36_9MICC
Ketone dehydrogenase medium subunit {ECO:0000313|EMBL:ELT44876.1}; TaxID=683150 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter nitrophenolicus.;
molybdopterin dehydrogenase FAD-binding protein
13_2_20cm_2_scaffold_2368_18
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14585..16891)
DNA (2307bp) protein (769aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein; K03520 carbon-monoxide dehydrogenase large subunit [EC:1.2.99.2] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUV4_RUBXD
13_2_20cm_2_scaffold_2368_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16888..17616)
DNA (729bp) protein (243aa)
Transcriptional regulator, GntR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAN4_CONWI
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADB51197.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="C
13_2_20cm_2_scaffold_2368_20
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

17705..19912
DNA (2208bp) protein (736aa)
Carbon monoxide dehydrogenase large chain (COdehydrogenase subunit L) (CO-DH L) id=4387242 bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein {ECO:0000313|EMBL:ACZ40224.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacte
13_2_20cm_2_scaffold_2368_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19936..21048
DNA (1113bp) protein (371aa)
Probable MFS transporter n=1 Tax=Pseudomonas aeruginosa (strain PA7) RepID=A6V7G6_PSEA7
MFS family transporter
MFS transporter {ECO:0000313|EMBL:KFF34967.1}; TaxID=1262663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VR
13_2_20cm_2_scaffold_2368_22
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21065..21949)
DNA (885bp) protein (295aa)
Alpha/beta hydrolase fold {ECO:0000313|EMBL:CEL15841.1}; EC=3.8.1.5 {ECO:0000313|EMBL:CEL15841.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporan
Alpha/beta hydrolase fold n=2 Tax=Saccharopolyspora erythraea RepID=A4FGW0_SACEN
alpha/beta hydrolase
13_2_20cm_2_scaffold_2368_23
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22069..23580
DNA (1512bp) protein (504aa)
AMP-dependent synthetase and ligase n=1 Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=A4FGW8_SACEN rbh
AMP-dependent synthetase/ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:CAM03293.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora
13_2_20cm_2_scaffold_2368_24
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23573..24172)
DNA (600bp) protein (200aa)
Putative aminomethyltransferase protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EII5_9CHLR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY73895.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
13_2_20cm_2_scaffold_2368_25
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24172..24969)
DNA (798bp) protein (266aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:CEL15848.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CEL15848.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardia
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUW2_RUBXD
short-chain dehydrogenase/reductase SDR
13_2_20cm_2_scaffold_2368_26
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24974..25627)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Mycobacterium phlei RIVM601174 RepID=I0RDS7_MYCPH
hypothetical protein; K09967 hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
13_2_20cm_2_scaffold_2368_27
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25639..26430)
DNA (792bp) protein (264aa)
ABC transporter-like protein n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0URK1_MYCVA
ABC transporter-like protein {ECO:0000313|EMBL:EJZ05248.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 259
Fe(3+)-transporting ATPase
13_2_20cm_2_scaffold_2368_28
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26411..27073)
DNA (663bp) protein (221aa)
Branched-chain amino acid transport system ATP-binding protein n=1 Tax=Thermobifida fusca (strain YX) RepID=Q47QP7_THEFY
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIH97355.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" s
branched-chain amino acid transport system ATP-binding protein
13_2_20cm_2_scaffold_2368_29
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(27074..28057)
DNA (984bp) protein (328aa)
Inner-membrane translocator n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UEB8_MYCVA rbh
Leucine/isoleucine/valine transporter permease subunit {ECO:0000313|EMBL:KJE76491.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobi
inner-membrane translocator
13_2_20cm_2_scaffold_2368_30
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28054..28941)
DNA (888bp) protein (296aa)
Inner-membrane translocator n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UJT1_MYCVA
Inner-membrane translocator {ECO:0000313|EMBL:EJZ05245.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 2595
inner-membrane translocator
Displaying items 1-30 of 35 in total

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