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13_2_20cm_2_scaffold_2430

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_2430_1
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1155)
DNA (1155bp) protein (385aa)
Transcriptional regulator, GntR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZR3_RUBXD
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABG03115.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;"
13_2_20cm_2_scaffold_2430_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

1331..1822
DNA (492bp) protein (164aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEA2_9BACT
msrA; protein-methionine-S-oxide reductase
13_2_20cm_2_scaffold_2430_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1861..2385
DNA (525bp) protein (175aa)
methionine-R-sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8U8_GEOUR
13_2_20cm_2_scaffold_2430_4
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2486..2965
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. BT03 RepID=J3C5L5_9BURK
NIPSNAP family containing protein {ECO:0000313|EMBL:EUC19001.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkhol
NIPSNAP family containing protein
13_2_20cm_2_scaffold_2430_5
unknown

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2962..3084
DNA (123bp) protein (41aa)

This feature has no annotations

13_2_20cm_2_scaffold_2430_6
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3103..3597
DNA (495bp) protein (165aa)
ketosteroid isomerase-like protein id=17344525 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
13_2_20cm_2_scaffold_2430_7
unknown

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3558..3806
DNA (249bp) protein (83aa)

This feature has no annotations

13_2_20cm_2_scaffold_2430_8
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3883..4434
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Burkholderia dolosa AUO158 RepID=A2W9Y8_9BURK
Lipocalin-like domain protein {ECO:0000313|EMBL:AIO24034.1}; TaxID=983594 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia c
lipocalin-like domain protein
13_2_20cm_2_scaffold_2430_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4434..5297
DNA (864bp) protein (288aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07T85_RHOP5
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABJ04849.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="
13_2_20cm_2_scaffold_2430_10
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5294..6082
DNA (789bp) protein (263aa)
Asp/Glu/Hydantoin racemase family protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ES80_9RHOB
Asp/Glu/Hydantoin racemase family protein {ECO:0000313|EMBL:EBA17250.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="
Asp/Glu racemase
13_2_20cm_2_scaffold_2430_11
RLO_PLX_64_10, Bacteria

Not on your lists

6209..6685
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037B6633
cupin Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
cupin
13_2_20cm_2_scaffold_2430_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

6716..7195
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MUK7_CORCM
endoribonuclease L-PSP Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_2_scaffold_2430_13
unknown

Not on your lists

7214..7684
DNA (471bp) protein (157aa)

This feature has no annotations

13_2_20cm_2_scaffold_2430_14
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8344..8550
DNA (207bp) protein (69aa)
Putative intracellular protease/amidase {ECO:0000313|EMBL:ABC30888.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella c
13_2_20cm_2_scaffold_2430_15
unknown

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comp(8749..9129)
DNA (381bp) protein (127aa)

This feature has no annotations

13_2_20cm_2_scaffold_2430_16
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9300..9776
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037BF8AD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEU37336.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC B
13_2_20cm_2_scaffold_2430_17
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9918..10991
DNA (1074bp) protein (358aa)
AraC family transcriptional regulator n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U7G3_MYXSD
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AGC43502.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;"
13_2_20cm_2_scaffold_2430_18
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11225..14356
DNA (3132bp) protein (1044aa)
TonB-dependent receptor n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z6E5_9GAMM
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AHX15606.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
13_2_20cm_2_scaffold_2430_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14522..15550
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PSU6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41438.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
fatty acid desaturase
13_2_20cm_2_scaffold_2430_20
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

15553..16167
DNA (615bp) protein (205aa)
Sterol desaturase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AL81_IGNAJ
Sterol desaturase
Sterol desaturase {ECO:0000313|EMBL:AFH49738.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium albu
13_2_20cm_2_scaffold_2430_21
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16413..17693
DNA (1281bp) protein (427aa)
2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
POSSIBLE 8-AMINO-7-OXONONANOATE SYNTHASE BIOF2 (AONS) (8-AMINO-7-KETOPELARGONATE SYNTHASE) n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G7N2_9DELT rbh
POSSIBLE 8-AMINO-7-OXONONANOATE SYNTHASE BIOF2 (AONS) (8-AMINO-7-KETOPELARGONATE SYNTHASE) {ECO:0000313|EMBL:EDM78110.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococca
13_2_20cm_2_scaffold_2430_22
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17713..17991
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5I7R3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY38010.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tann
CDP-alcohol phosphatidyltransferase
Displaying 22 items

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