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13_2_20cm_2_scaffold_246

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_246_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1..546
DNA (546bp) protein (182aa)
ccdA; cytochrome c-type biogenesis protein CcdA (EC:1.8.-.-); K06196 cytochrome c-type biogenesis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Cytochrome c-type biogenesis protein CcdA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W2_GEMAT
cytochrome c biogenesis protein transmembrane region
13_2_20cm_2_scaffold_246_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

764..1546
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_2_scaffold_246_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1586..3394)
DNA (1809bp) protein (603aa)
Gamma-glutamyltranspeptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W5_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
gamma-glutamyltransferase
13_2_20cm_2_scaffold_246_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

3459..4403
DNA (945bp) protein (315aa)
hypothetical protein; K07106 N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W7_GEMAT
N-acetylmuramic acid 6-phosphate etherase
13_2_20cm_2_scaffold_246_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4427..5524
DNA (1098bp) protein (366aa)
anmK; anhydro-N-acetylmuramic acid kinase; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4J5_THERP id=5224368 bin=16ft_combo_ws3_JS1 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Anhydro-N-acetylmuramic acid kinase
13_2_20cm_2_scaffold_246_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5521..6954
DNA (1434bp) protein (478aa)
glycosidase (EC:3.2.1.-); K05349 beta-glucosidase [EC:3.2.1.21] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Glycosidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W9_GEMAT
glycoside hydrolase family 3 domain protein
13_2_20cm_2_scaffold_246_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6985..8391)
DNA (1407bp) protein (469aa)
Pkn9 associate protein 1 n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MXJ7_CORCM
FHA domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
k9ap1; Pkn9 associate protein 1
13_2_20cm_2_scaffold_246_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8388..9419)
DNA (1032bp) protein (344aa)
putative serine/threonine protein phosphatase (EC:3.1.3.16); K01090 protein phosphatase [EC:3.1.3.16] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative serine/threonine protein phosphatase (EC:3.1.3.16)
Putative serine/threonine protein phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X0_GEMAT
13_2_20cm_2_scaffold_246_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(9422..10999)
DNA (1578bp) protein (526aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA94_GEMAT
protein kinase
13_2_20cm_2_scaffold_246_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10996..12039)
DNA (1044bp) protein (348aa)
FHA domain containing protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IKZ4_ANADE
FHA domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
FHA domain-containing protein
13_2_20cm_2_scaffold_246_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12150..14003
DNA (1854bp) protein (618aa)
putative N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X1_GEMAT
cell wall hydrolase/autolysin
13_2_20cm_2_scaffold_246_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14006..16870
DNA (2865bp) protein (955aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X2_GEMAT
WD40-like beta Propeller containing protein
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:AHG90382.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_246_13
RLO_PLX_64_10, Bacteria

Not on your lists

16947..19202
DNA (2256bp) protein (752aa)
TPR repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
13_2_20cm_2_scaffold_246_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19260..20597
DNA (1338bp) protein (446aa)
putative serine/threonine protein kinase; K11912 serine/threonine-protein kinase PpkA [EC:2.7.11.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
serine/threonine protein kinase n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B765FC
protein kinase
13_2_20cm_2_scaffold_246_15
unknown

Not on your lists

20594..20980
DNA (387bp) protein (129aa)

This feature has no annotations

13_2_20cm_2_scaffold_246_16
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20944..21486
DNA (543bp) protein (181aa)
Isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKR7_SINAD
carbonic anhydrase/acetyltransferase
Isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase {ECO:0000313|EMBL:AGA29852.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomyceta
13_2_20cm_2_scaffold_246_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21652..24132
DNA (2481bp) protein (827aa)
nrdJ; ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribonucleoside-diphosphate reductase n=2 Tax=Chloroflexus RepID=A9WCH6_CHLAA
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
13_2_20cm_2_scaffold_246_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

24232..24636
DNA (405bp) protein (135aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_246_19
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(24641..25219)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XDG1_NAKMY
hypothetical protein Tax=RBG_16_Chloroflexi_63_12_curated
hypothetical protein
13_2_20cm_2_scaffold_246_20
unknown

Not on your lists

25246..25629
DNA (384bp) protein (128aa)

This feature has no annotations

13_2_20cm_2_scaffold_246_21
Bordetella holmesii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25740..26201
DNA (462bp) protein (154aa)
MarR family transcriptional regulator n=2 Tax=Bordetella holmesii RepID=M5NLF8_9BORD
marR family protein
MarR family protein {ECO:0000313|EMBL:KAK83683.1}; TaxID=1331212 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella holmesii CDC-H
13_2_20cm_2_scaffold_246_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

26420..27199
DNA (780bp) protein (260aa)
silent information regulator protein Sir2; K12410 NAD-dependent deacetylase [EC:3.5.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NAD-dependent protein deacylase n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FE61_VERMA
silent information regulator protein Sir2
13_2_20cm_2_scaffold_246_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

27333..28481
DNA (1149bp) protein (383aa)
pykA; pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pykA; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7D6_GEMAT
13_2_20cm_2_scaffold_246_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

28483..29286
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7D7_GEMAT
hypothetical protein; K06167 PhnP protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
beta-lactamase domain protein
13_2_20cm_2_scaffold_246_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

29329..30705
DNA (1377bp) protein (459aa)
Putative fructose-bisphosphate aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7D9_GEMAT
putative fructose-bisphosphate aldolase Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative fructose-bisphosphate aldolase
13_2_20cm_2_scaffold_246_26
unknown

Not on your lists

30702..31046
DNA (345bp) protein (115aa)

This feature has no annotations

13_2_20cm_2_scaffold_246_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

31043..31936
DNA (894bp) protein (298aa)
tRNA-processing ribonuclease BN n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E1_GEMAT
membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribonuclease BN
13_2_20cm_2_scaffold_246_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

31933..32967
DNA (1035bp) protein (345aa)
threonine aldolase (EC:4.1.2.5); K01620 threonine aldolase [EC:4.1.2.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
threonine aldolase (EC:4.1.2.5)
Threonine aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E2_GEMAT rbh
13_2_20cm_2_scaffold_246_29
Lachancea lanzarotensis, Lachancea, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

33005..34618
DNA (1614bp) protein (538aa)
PREDICTED: proline-rich receptor-like protein kinase PERK1-like n=1 Tax=Cucumis sativus RepID=UPI0002B48D70
LALA0S15e00100g1_1 {ECO:0000313|EMBL:CEP64908.1}; TaxID=1245769 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Lachancea.;" s
aminodeoxychorismate lyase
13_2_20cm_2_scaffold_246_30
unknown

Not on your lists

36035..37501
DNA (1467bp) protein (489aa)

This feature has no annotations

Displaying items 1-30 of 49 in total

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